[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 720 items for (author: hill & c)

EMDB-41373:
E. coli MraY mutant-T23P
Method: single particle / : Orta AK, Li YE, Clemons WM

PDB-8tlu:
E. coli MraY mutant-T23P
Method: single particle / : Orta AK, Li YE, Clemons WM

EMDB-18229:
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2, Map 2)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-18234:
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1, Map 1)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-18235:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3, Map 3)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-18237:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4, Map 4)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-18238:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 and TSSC4 (Map 5)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-18239:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 and TSSC4 (Map 6)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

PDB-8q7q:
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

PDB-8q7v:
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

PDB-8q7w:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

PDB-8q7x:
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)
Method: single particle / : Riabov Bassat D, Plaschka C, Vorlaender MK

EMDB-19406:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-19407:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-41277:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

EMDB-41278:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

EMDB-43766:
Kir6.2-Q52R/SUR1 apo closed channel
Method: single particle / : Driggers CM, Shyng SL

PDB-8ti1:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

PDB-8ti2:
Cryo-EM structure of a SUR1/Kir6.2-Q52R ATP-sensitive potassium channel in the presence of PIP2 in the open conformation
Method: single particle / : Driggers CM, Shyng SL

EMDB-15769:
A gap across the beta rings in 20S proteasome
Method: single particle / : Szenkier N, Arie M, Matzov D, Sertchook R, Carmeli R, Cascio P, Stanhill A, Shalev Benami M, Navon A

EMDB-15767:
Bovine 20S proteasome, untreated
Method: single particle / : Szenkier N, Arie M, Matzov D, Sertchook R, Carmeli R, Cascio P, Stanhill A, Shalev Benami M, Navon A

EMDB-15768:
Partially disassembled 20S proteasome upon disulfide bond formation.
Method: single particle / : Szenkier N, Arie M, Matzov D, Sertchook R, Carmeli R, Cascio P, Stanhill A, Shalev Benami M, Navon A

PDB-8azk:
Bovine 20S proteasome, untreated
Method: single particle / : Szenkier N, Arie M, Matzov D, Sertchook R, Carmeli R, Cascio P, Stanhill A, Shalev Benami M, Navon A

EMDB-18496:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18499:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map A
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18500:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map B.
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18502:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map D
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18503:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba.- Map E
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18504:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map F
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

PDB-8qma:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18501:
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map C
Method: single particle / : do Prado PFV, Ahrens FM, Pfannschmidt T, Hillen HS

EMDB-18207:
Ubiquitin ligation to substrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-FEM1C with trapped UBE2R2~donor UB-Sil1 peptide, Glacios map
Method: single particle / : Liwocha J, Prabu JR, Kleiger G, Schulman BA

EMDB-18230:
Ubiquitin ligation to substrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-FEM1C with trapped UBE2R2~donor UB-Sil1 peptide
Method: single particle / : Liwocha J, Prabu JR, Kleiger G, Schulman BA

EMDB-18915:
Ubiquitin ligation to neosubstrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-VHL-MZ1 with trapped UBE2R2~donor UB-BRD4 BD2
Method: single particle / : Liwocha J, Prabu JR, Kleiger G, Schulman BA

PDB-8q7r:
Ubiquitin ligation to substrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-FEM1C with trapped UBE2R2~donor UB-Sil1 peptide
Method: single particle / : Liwocha J, Prabu JR, Kleiger G, Schulman BA

PDB-8r5h:
Ubiquitin ligation to neosubstrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-VHL-MZ1 with trapped UBE2R2~donor UB-BRD4 BD2
Method: single particle / : Liwocha J, Prabu JR, Kleiger G, Schulman BA

EMDB-19067:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

EMDB-19076:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

EMDB-19077:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

PDB-8rd8:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

PDB-8rdv:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

PDB-8rdw:
Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).
Method: single particle / : Helena-Bueno K, Rybak MY, Gagnon MG, Hill CH, Melnikov SV

EMDB-43074:
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

EMDB-43075:
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

EMDB-43076:
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

EMDB-43077:
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Structure 6)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

EMDB-43078:
Hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) bound to Mycobacterium smegmatis 70S ribosome, from focused 3D classification and refinement (Structure 6)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

PDB-8v9j:
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)
Method: single particle / : Rybak MY, Helena-Bueno K, Hill CH, Melnikov SV, Gagnon MG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more