[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 63 items for (author: o & brien & r)

EMDB-29898:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

PDB-8gag:
Cannabinoid receptor 1-Gi complex with novel ligand
Method: single particle / : Tummino TA, Iliopoulos-Tsoutsouvas C, Braz JM, O'Brien ES, Krishna Kumar K, Makriyannis M, Basbaum AI, Shoichet BK

EMDB-41069:
CDPPB-bound inactive mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

EMDB-41092:
Quis-bound intermediate mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

EMDB-41099:
Quis-bound intermediate mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

EMDB-41139:
Quis and CDPPB bound active mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

PDB-8t6j:
CDPPB-bound inactive mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

PDB-8t7h:
Quis-bound intermediate mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

PDB-8t8m:
Quis-bound intermediate mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

PDB-8tao:
Quis and CDPPB bound active mGlu5
Method: single particle / : Krishna Kumar K, Wang H, Kobilka BK

EMDB-16035:
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain (Individual 1)
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-16039:
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-16064:
Cryo-electron tomogram of an extracellular vesicle containing tau filaments isolated from Alzheimer's Disease patient brain
Method: electron tomography / : Behr TS, Ryskeldi-Falcon B

PDB-8bgs:
Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

PDB-8bgv:
Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Method: helical / : Behr TS, Ryskeldi-Falcon B

EMDB-29453:
GCGR-Gs complex in the presence of RAMP2
Method: single particle / : Krishna Kumar K, O'Brien ES, Wang H, Montabana E, Kobilka BK

PDB-8fu6:
GCGR-Gs complex in the presence of RAMP2
Method: single particle / : Krishna Kumar K, O'Brien ES, Wang H, Montabana E, Kobilka BK

EMDB-27393:
D. vulgaris type I-C Cascade bound to dsDNA target
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

EMDB-27403:
type I-C Cascade bound to ssDNA target
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

EMDB-27412:
type I-C Cascade bound to AcrIF2
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

PDB-8dej:
D. vulgaris type I-C Cascade bound to dsDNA target
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

PDB-8dfa:
type I-C Cascade bound to ssDNA target
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

PDB-8dfs:
type I-C Cascade bound to AcrIF2
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

EMDB-27402:
type I-C Cascade
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

EMDB-27409:
type I-C Cascade bound to AcrIC4
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

PDB-8dex:
type I-C Cascade
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

PDB-8dfo:
type I-C Cascade bound to AcrIC4
Method: single particle / : O'Brien RE, Bravo JPK, Ramos D, Hibshman GN, Wright JT, Taylor DW

EMDB-13427:
Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I
Method: single particle / : Susac L, Thomas C, Tampe R

PDB-7phr:
Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I
Method: single particle / : Susac L, Thomas C, Tampe R

EMDB-32389:
PlmCasX-sgRNAv1-dsDNA ternary complex at nts loading state
Method: single particle / : Zhang S, Liu JJG

EMDB-32390:
PlmCasX-sgRNAv1-dsDNA ternary complex at ts loading state
Method: single particle / : Zhang S, Liu JJG

EMDB-32391:
PlmCasX-sgRNAv1-dsDNA ternary complex at nts loading state with flexible H2 domain
Method: single particle / : Zhang S, Liu JJG

EMDB-32392:
PlmCasX-sgRNAv2-dsDNA ternary complex at nts loading state
Method: single particle / : Zhang S, Liu JJG

PDB-7way:
PlmCasX-sgRNAv1-dsDNA ternary complex at nts loading state
Method: single particle / : Zhang S, Liu JJG

PDB-7waz:
PlmCasX-sgRNAv1-dsDNA ternary complex at ts loading state
Method: single particle / : Zhang S, Liu JJG

PDB-7wb0:
PlmCasX-sgRNAv1-dsDNA ternary complex at nts loading state with flexible H2 domain
Method: single particle / : Zhang S, Liu JJG

PDB-7wb1:
PlmCasX-sgRNAv2-dsDNA ternary complex at nts loading state
Method: single particle / : Zhang S, Liu JJG

EMDB-21225:
Cryo-EM structure of PilA-N/C from Geobacter sulfurreducens
Method: helical / : Gu Y, Srikanth V

PDB-6vk9:
Cryo-EM structure of PilA-N/C from Geobacter sulfurreducens
Method: helical / : Gu Y, Srikanth V, Malvankar NS, Samatey FA

EMDB-22040:
Asterix/Gtsf1 from mouse (full-length protein) bound to co-purifying tRNA
Method: single particle / : Ipsaro JJ, Joshua-Tor L

EMDB-22041:
Asterix/Gtsf1 from mouse (residues 1-45; zinc finger 1) bound to co-purifying tRNA
Method: single particle / : Ipsaro JJ, Joshua-Tor L

EMDB-23393:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C601
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23394:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C603
Method: single particle / : Yang Z, Barnes CO, Bjorkman PJ

EMDB-23395:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C643
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23396:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C663
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23397:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C666
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23398:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C669
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-23399:
Structure of the SARS-CoV-2 spike trimer in complex with mRNA vaccine induced neutralizing antibody C670
Method: single particle / : Yang Z, Barnes CO, Bjorkman PJ

EMDB-23118:
Orexin Receptor 2 (OX2R) in Complex with G Protein and Natural Peptide-Agonist Orexin B (OxB)
Method: single particle / : Hong C, Byrne NJ, Zamlynny B, Tummala S, Xiao L, Shipman JM, Partridge AT, Minnick C, Breslin MJ, Rudd MT, Stachel SJ, Rada VL, Kern JC, Armacost KA, Hollingsworth SA, O'Brien JA, Hall DL, McDonald TP, Strickland C, Brooun A, Soisson SM, Hollenstein K

EMDB-23119:
Orexin Receptor 2 (OX2R) in Complex with G Protein and Small-Molecule Agonist Compound 1
Method: single particle / : Hong C, Byrne NJ, Zamlynny B, Tummala S, Xiao L, Shipman JM, Partridge AT, Minnick C, Breslin MJ, Rudd MT, Stachel SJ, Rada VL, Kern JC, Armacost KA, Hollingsworth SA, O'Brien JA, Hall DL, McDonald TP, Strickland C, Brooun A, Soisson SM, Hollenstein K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more