[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 37 items for (author: hung & nk)

EMDB-41837:
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
Method: single particle / : Wu CG, Xing Y

PDB-8u1x:
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
Method: single particle / : Wu CG, Xing Y

EMDB-42018:
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
Method: single particle / : Wu CG, Xing Y

PDB-8u89:
The structure of the PP2A-B56Delta holoenzyme mutant - E197K
Method: single particle / : Wu CG, Xing Y

EMDB-25448:
Negative-stain EM reconstruction of SpFN_1B-06-PL, a SARS-CoV-2 spike fused to H.pylori ferritin nanoparticle vaccine candidate
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25449:
RFN_131, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Receptor-Binding Domain
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25450:
pCoV146, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike Receptor-Binding and N-Terminal Domains
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-25451:
pCoV111, a Ferritin-based Nanoparticle Vaccine Candidate Displaying the SARS-CoV-2 Spike S1 Subunit
Method: single particle / : Thomas PV, Smith C, Chen WH, Sankhala RS, Hajduczki A, Choe M, Martinez E, Chang W, Peterson CE, Karch C, Gohain N, Kannadka CB, de Val N, Joyce MG, Modjarrad K

EMDB-12043:
AcrB in cycloalkane amphipol
Method: single particle / : Higgins AJ, Flynn AJ, Muench SP

PDB-7b5p:
AcrB in cycloalkane amphipol
Method: single particle / : Higgins AJ, Flynn AJ, Muench SP

EMDB-31089:
Cryo-EM structure of the octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS

EMDB-31090:
Cryo-EM structure of the hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Method: single particle / : Minato T, Teramoto T, Adachi N, Hung NK, Yamada K, Kawasaki M, Akutsu M, Moriya T, Senda T, Ogo S, Kakuta Y, Yoon KS

EMDB-23521:
Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442
Method: single particle / : Gilman MSA, McLellan JS

PDB-7lue:
Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442
Method: single particle / : Gilman MSA, McLellan JS

EMDB-23520:
Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Method: single particle / : Wrapp D, McLellan JS

PDB-7luc:
Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Method: single particle / : Wrapp D, McLellan JS

EMDB-9943:
Structure of NLRP1 CARD filament
Method: helical / : Qin G, Chenrui X

EMDB-9946:
Structure of NLRC4 CARD filament
Method: helical / : Gong Q, Xu C

EMDB-9947:
Structure of ASC CARD filament
Method: helical / : Gong Q, Xu C

EMDB-9948:
Structure of unknow protein 4
Method: helical / : Gong Q, Xu C

PDB-6k7v:
Structure of NLRP1 CARD filament
Method: helical / : Gong Q, Xu C, Zhang J, Wu B

PDB-6k8j:
Structure of NLRC4 CARD filament
Method: helical / : Gong Q, Xu C, Zhang J, Boo ZZ, Wu B

PDB-6k99:
Structure of ASC CARD filament
Method: helical / : Gong Q, Xu C, Zhang J, Boo ZZ, Wu B

PDB-6k9f:
Structure of unknow protein 4
Method: helical / : Gong Q, Xu C, Zhang J, Boo ZZ, Wu B

EMDB-22221:
SARS-CoV-2 HexaPro S One RBD up
Method: single particle / : Wrapp D, Hsieh CL, Goldsmith JA, McLellan JS

EMDB-22222:
SARS-CoV-2 HexaPro S Two RBD up
Method: single particle / : Wrapp D, Hsieh CL, Goldsmith JA, McLellan JS

PDB-6xkl:
SARS-CoV-2 HexaPro S One RBD up
Method: single particle / : Wrapp D, Hsieh CL, Goldsmith JA, McLellan JS

EMDB-22137:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies
Method: single particle / : Franklin MC, Saotome K, Romero Hernandez A, Zhou Y

PDB-6xdg:
Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies
Method: single particle / : Franklin MC, Saotome K, Romero Hernandez A, Zhou Y

EMDB-20812:
Cryo-EM structure of mammalian Ric-8A:Galpha(i):nanobody complex
Method: single particle / : Mou TC, Zhang K, Johnston JD, Chiu W, Sprang SR

PDB-6ukt:
Cryo-EM structure of mammalian Ric-8A:Galpha(i):nanobody complex
Method: single particle / : Mou TC, Zhang K, Johnston JD, Chiu W, Sprang SR

EMDB-4590:
Leishmania tarentolae proteasome 20S subunit complexed with GSK3494245
Method: single particle / : Rowland P, Goswami P

EMDB-4591:
Leishmania tarentolae proteasome 20S subunit apo structure
Method: single particle / : Goswami P, Rowland P

PDB-6qm7:
Leishmania tarentolae proteasome 20S subunit complexed with GSK3494245
Method: single particle / : Rowland P, Goswami P

PDB-6qm8:
Leishmania tarentolae proteasome 20S subunit apo structure
Method: single particle / : Rowland P, Goswami P

EMDB-3561:
map of the RNA polymerase lambda-based antitermination complex solved by cryo-EM
Method: single particle / : Said N, Krupp F

PDB-5ms0:
pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by cryo-EM
Method: single particle / : Said N, Krupp F

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more