[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 41 items for (author: di & cera & e)

EMDB-42405:
Preliminary map of the Prothrombin-prothrombinase complex on nano discs
Method: single particle / : Stojanovski BM, Mohammed BM, Di Cera E

EMDB-41400:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41401:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41402:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41403:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41407:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41408:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-41411:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

PDB-8tn9:
Structural architecture of the acidic region of the B domain of coagulation factor V
Method: single particle / : Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E

EMDB-28192:
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(dominant class)
Method: single particle / : Tripathi P, Kwong PD

EMDB-28196:
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(class 2)
Method: single particle / : Tripathi P, Kwong PD

PDB-8ek1:
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(dominant class)
Method: single particle / : Tripathi P, Kwong PD

PDB-8eka:
Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(class 2)
Method: single particle / : Tripathi P, Kwong PD

EMDB-29008:
Cryo-EM structure of coagulation factor V short
Method: single particle / : Mohammed BM, Pelc LA, Rau MJ, Di Cera E

EMDB-29009:
Cryo-EM structure of coagulation factor V short
Method: single particle / : Mohammed BM, Pelc LA, Rau MJ, Di Cera E

EMDB-29010:
Cryo-EM structure of coagulation factor V short
Method: single particle / : Mohammed BM, Pelc LA, Rau MJ, Di Cera E

EMDB-29011:
Cryo-EM structure of coagulation factor V short
Method: single particle / : Mohammed BM, Pelc LA, Rau MJ, Di Cera E

PDB-8fdg:
Cryo-EM structure of coagulation factor V short
Method: single particle / : Mohammed BM, Pelc LA, Rau MJ, Di Cera E

EMDB-27194:
CIS43 Variant 10 bound to pfCSP Class 4
Method: single particle / : Gorman J, Kwong PD

EMDB-27195:
CIS43 Variant 10 bound to pfCSP Class 2
Method: single particle / : Gorman J, Kwong PD

EMDB-27202:
CIS43 Variant 10 bound to pfCSP Class 1
Method: single particle / : Gorman J, Kwong PD

EMDB-27222:
CIS43 Variant 10 bound to pfCSP Class 3
Method: single particle / : Gorman J, Kwong PD

EMDB-26060:
Cryo-em structure of human prothrombin:prothrombinase at 4.1 Angstrom resolution
Method: single particle / : Di Cera E, Ruben EA

EMDB-26061:
Cryo-em structure of human prothrombinase on a nanodisc at 5.3 Angstrom resolution
Method: single particle / : Di Cera E, Ruben EA

PDB-7tpp:
Cryo-em structure of human prothrombin:prothrombinase at 4.1 Angstrom resolution
Method: single particle / : Di Cera E, Ruben EA

PDB-7tpq:
Cryo-em structure of human prothrombinase on a nanodisc at 5.3 Angstrom resolution
Method: single particle / : Di Cera E, Ruben EA

EMDB-23049:
Cryo-EM structure of human Factor V at 3.6 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

PDB-7kvf:
Cryo-EM structure of human Factor V at 3.6 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

EMDB-23048:
Cryo-EM structure of human Factor V at 3.3 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

EMDB-23067:
Cryo-EM structure of human Factor Va at 4.4 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

PDB-7kve:
Cryo-EM structure of human Factor V at 3.3 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

PDB-7kxy:
Cryo-EM structure of human Factor Va at 4.4 Angstrom resolution
Method: single particle / : Ruben EA, Di Cera E

EMDB-9294:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map
Method: single particle / : Borst AJ, Weidle CE, Gray MD, Frenz B, Snijder J, Joyce MG, Georgiev IS, Stewart-Jones GBE, Kwong PD, McGuire AT, DiMaio F, Stamatatos L, Pancera M, Veesler D

EMDB-9295:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, unsharpened map
Method: single particle / : Borst AJ, Weidle CE

EMDB-9303:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map
Method: single particle / : Borst AJ, Weidle CE, Gray MD, Frenz B, Snijder J, Joyce MG, Georgiev IS, Stewart-Jones GBE, Kwong PD, McGuire AT, DiMaio F, Stamatatos L, Pancera M, Veesler D

EMDB-9304:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, unsharpened map
Method: single particle / : Borst AJ, Weidle CE

PDB-6myy:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map
Method: single particle / : Borst AJ, Weidle CE, Gray MD, Frenz B, Snijder J, Joyce MG, Georgiev IS, Stewart-Jones GBE, Kwong PD, McGuire AT, DiMaio F, Stamatatos L, Pancera M, Veesler D

PDB-6mzj:
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map
Method: single particle / : Borst AJ, Weidle CE, Gray MD, Frenz B, Snijder J, Joyce MG, Georgiev IS, Stewart-Jones GBE, Kwong PD, McGuire AT, DiMaio F, Stamatatos L, Pancera M, Veesler D

EMDB-7344:
An anti-gH/gL antibody that neutralizes dual-tropic infection defines a site of vulnerability on Epstein-Barr virus
Method: single particle / : Snijder J, Ortego MS, Weidle C, Stuart AB, Gray MA, McElrath MJ, Pancera M, Veesler D, McGuire AT, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-6c5v:
An anti-gH/gL antibody that neutralizes dual-tropic infection defines a site of vulnerability on Epstein-Barr virus
Method: single particle / : Snijder J, Ortego MS, Weidle C, Stuart AB, Gray MA, McElrath MJ, Pancera M, Veesler D, McGuire AT, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-5856:
Negative stain reconstruction of HIV envelope glycoprotein BG505 SOSIP.664 in complex with CAP256-VRC26.09 Fab
Method: single particle / : Ward AB, Kim HJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more