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- PDB-6y67: Structure of apo Finch Polyomavirus VP1 -

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Basic information

Entry
Database: PDB / ID: 6y67
TitleStructure of apo Finch Polyomavirus VP1
ComponentsCapsid protein VP1
KeywordsVIRAL PROTEIN / Major Capsid Protein / Polyomavirus
Function / homologyCapsid protein VP1,Polyomavirus / Polyomavirus capsid protein VP1 superfamily / Polyomavirus coat protein / Double-stranded DNA virus, group I, capsid / T=7 icosahedral viral capsid / virion attachment to host cell / structural molecule activity / Capsid protein VP1
Function and homology information
Biological speciesFinch polyomavirus
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.618 Å
AuthorsStroh, L.J. / Rustmeier, N.H. / Stehle, T.
Funding support Germany, 1items
OrganizationGrant numberCountry
German Research Foundation (DFG)FOR2327 Germany
CitationJournal: Mbio / Year: 2020
Title: Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Authors: Stroh, L.J. / Rustmeier, N.H. / Blaum, B.S. / Botsch, J. / Rossler, P. / Wedekink, F. / Lipkin, W.I. / Mishra, N. / Stehle, T.
History
DepositionFeb 26, 2020Deposition site: PDBE / Processing site: PDBE
Revision 1.0Jul 8, 2020Provider: repository / Type: Initial release
Revision 1.1Aug 12, 2020Group: Database references / Category: citation
Item: _citation.journal_volume / _citation.pdbx_database_id_PubMed / _citation.title
Revision 1.2Jan 24, 2024Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description
Category: atom_type / chem_comp_atom ...atom_type / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model
Item: _atom_type.pdbx_N_electrons / _atom_type.pdbx_scat_Z ..._atom_type.pdbx_N_electrons / _atom_type.pdbx_scat_Z / _database_2.pdbx_DOI / _database_2.pdbx_database_accession

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
AAA: Capsid protein VP1
BBB: Capsid protein VP1
CCC: Capsid protein VP1
DDD: Capsid protein VP1
EEE: Capsid protein VP1
FFF: Capsid protein VP1
GGG: Capsid protein VP1
HHH: Capsid protein VP1
III: Capsid protein VP1
JJJ: Capsid protein VP1
KKK: Capsid protein VP1
LLL: Capsid protein VP1
MMM: Capsid protein VP1
NNN: Capsid protein VP1
OOO: Capsid protein VP1
PPP: Capsid protein VP1
QQQ: Capsid protein VP1
RRR: Capsid protein VP1
SSS: Capsid protein VP1
TTT: Capsid protein VP1
UUU: Capsid protein VP1
VVV: Capsid protein VP1
WWW: Capsid protein VP1
XXX: Capsid protein VP1
YYY: Capsid protein VP1
ZZZ: Capsid protein VP1
aaa: Capsid protein VP1
bbb: Capsid protein VP1
ccc: Capsid protein VP1
ddd: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)963,826101
Polymers961,30930
Non-polymers2,51771
Water13,529751
1
AAA: Capsid protein VP1
BBB: Capsid protein VP1
CCC: Capsid protein VP1
DDD: Capsid protein VP1
EEE: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,67918
Polymers160,2185
Non-polymers46113
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
FFF: Capsid protein VP1
GGG: Capsid protein VP1
HHH: Capsid protein VP1
III: Capsid protein VP1
JJJ: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,75020
Polymers160,2185
Non-polymers53215
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
KKK: Capsid protein VP1
LLL: Capsid protein VP1
MMM: Capsid protein VP1
NNN: Capsid protein VP1
OOO: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,75020
Polymers160,2185
Non-polymers53215
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
4
PPP: Capsid protein VP1
QQQ: Capsid protein VP1
RRR: Capsid protein VP1
SSS: Capsid protein VP1
TTT: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,57315
Polymers160,2185
Non-polymers35510
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
5
UUU: Capsid protein VP1
VVV: Capsid protein VP1
WWW: Capsid protein VP1
XXX: Capsid protein VP1
YYY: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,53714
Polymers160,2185
Non-polymers3199
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
6
ZZZ: Capsid protein VP1
aaa: Capsid protein VP1
bbb: Capsid protein VP1
ccc: Capsid protein VP1
ddd: Capsid protein VP1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)160,53714
Polymers160,2185
Non-polymers3199
Water905
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)145.048, 91.614, 352.326
Angle α, β, γ (deg.)90.000, 92.100, 90.000
Int Tables number4
Space group name H-MP1211
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11Chains A B
22Chains A C
33Chains A D
44Chains A E
55Chains A F
66Chains A G
77Chains A H
88Chains A I
99Chains A J
1010Chains A K
1111Chains A L
1212Chains A M
1313Chains A N
1414Chains A O
1515Chains A P
1616Chains A Q
1717Chains A R
1818Chains A S
1919Chains A T
2020Chains A U
2121Chains A V
2222Chains A W
2323Chains A X
2424Chains A Y
2525Chains A Z
2626Chains A a
2727Chains A b
2828Chains A c
2929Chains A d
3030Chains B C
3131Chains B D
3232Chains B E
3333Chains B F
3434Chains B G
3535Chains B H
3636Chains B I
3737Chains B J
3838Chains B K
3939Chains B L
4040Chains B M
4141Chains B N
4242Chains B O
4343Chains B P
4444Chains B Q
4545Chains B R
4646Chains B S
4747Chains B T
4848Chains B U
4949Chains B V
5050Chains B W
5151Chains B X
5252Chains B Y
5353Chains B Z
5454Chains B a
5555Chains B b
5656Chains B c
5757Chains B d
5858Chains C D
5959Chains C E
6060Chains C F
6161Chains C G
6262Chains C H
6363Chains C I
6464Chains C J
6565Chains C K
6666Chains C L
6767Chains C M
6868Chains C N
6969Chains C O
7070Chains C P
7171Chains C Q
7272Chains C R
7373Chains C S
7474Chains C T
7575Chains C U
7676Chains C V
7777Chains C W
7878Chains C X
7979Chains C Y
8080Chains C Z
8181Chains C a
8282Chains C b
8383Chains C c
8484Chains C d
8585Chains D E
8686Chains D F
8787Chains D G
8888Chains D H
8989Chains D I
9090Chains D J
9191Chains D K
9292Chains D L
9393Chains D M
9494Chains D N
9595Chains D O
9696Chains D P
9797Chains D Q
9898Chains D R
9999Chains D S
100100Chains D T
101101Chains D U
102102Chains D V
103103Chains D W
104104Chains D X
105105Chains D Y
106106Chains D Z
107107Chains D a
108108Chains D b
109109Chains D c
110110Chains D d
111111Chains E F
112112Chains E G
113113Chains E H
114114Chains E I
115115Chains E J
116116Chains E K
117117Chains E L
118118Chains E M
119119Chains E N
120120Chains E O
121121Chains E P
122122Chains E Q
123123Chains E R
124124Chains E S
125125Chains E T
126126Chains E U
127127Chains E V
128128Chains E W
129129Chains E X
130130Chains E Y
131131Chains E Z
132132Chains E a
133133Chains E b
134134Chains E c
135135Chains E d
136136Chains F G
137137Chains F H
138138Chains F I
139139Chains F J
140140Chains F K
141141Chains F L
142142Chains F M
143143Chains F N
144144Chains F O
145145Chains F P
146146Chains F Q
147147Chains F R
148148Chains F S
149149Chains F T
150150Chains F U
151151Chains F V
152152Chains F W
153153Chains F X
154154Chains F Y
155155Chains F Z
156156Chains F a
157157Chains F b
158158Chains F c
159159Chains F d
160160Chains G H
161161Chains G I
162162Chains G J
163163Chains G K
164164Chains G L
165165Chains G M
166166Chains G N
167167Chains G O
168168Chains G P
169169Chains G Q
170170Chains G R
171171Chains G S
172172Chains G T
173173Chains G U
174174Chains G V
175175Chains G W
176176Chains G X
177177Chains G Y
178178Chains G Z
179179Chains G a
180180Chains G b
181181Chains G c
182182Chains G d
183183Chains H I
184184Chains H J
185185Chains H K
186186Chains H L
187187Chains H M
188188Chains H N
189189Chains H O
190190Chains H P
191191Chains H Q
192192Chains H R
193193Chains H S
194194Chains H T
195195Chains H U
196196Chains H V
197197Chains H W
198198Chains H X
199199Chains H Y
200200Chains H Z
201201Chains H a
202202Chains H b
203203Chains H c
204204Chains H d
205205Chains I J
206206Chains I K
207207Chains I L
208208Chains I M
209209Chains I N
210210Chains I O
211211Chains I P
212212Chains I Q
213213Chains I R
214214Chains I S
215215Chains I T
216216Chains I U
217217Chains I V
218218Chains I W
219219Chains I X
220220Chains I Y
221221Chains I Z
222222Chains I a
223223Chains I b
224224Chains I c
225225Chains I d
226226Chains J K
227227Chains J L
228228Chains J M
229229Chains J N
230230Chains J O
231231Chains J P
232232Chains J Q
233233Chains J R
234234Chains J S
235235Chains J T
236236Chains J U
237237Chains J V
238238Chains J W
239239Chains J X
240240Chains J Y
241241Chains J Z
242242Chains J a
243243Chains J b
244244Chains J c
245245Chains J d
246246Chains K L
247247Chains K M
248248Chains K N
249249Chains K O
250250Chains K P
251251Chains K Q
252252Chains K R
253253Chains K S
254254Chains K T
255255Chains K U
256256Chains K V
257257Chains K W
258258Chains K X
259259Chains K Y
260260Chains K Z
261261Chains K a
262262Chains K b
263263Chains K c
264264Chains K d
265265Chains L M
266266Chains L N
267267Chains L O
268268Chains L P
269269Chains L Q
270270Chains L R
271271Chains L S
272272Chains L T
273273Chains L U
274274Chains L V
275275Chains L W
276276Chains L X
277277Chains L Y
278278Chains L Z
279279Chains L a
280280Chains L b
281281Chains L c
282282Chains L d
283283Chains M N
284284Chains M O
285285Chains M P
286286Chains M Q
287287Chains M R
288288Chains M S
289289Chains M T
290290Chains M U
291291Chains M V
292292Chains M W
293293Chains M X
294294Chains M Y
295295Chains M Z
296296Chains M a
297297Chains M b
298298Chains M c
299299Chains M d
300300Chains N O
301301Chains N P
302302Chains N Q
303303Chains N R
304304Chains N S
305305Chains N T
306306Chains N U
307307Chains N V
308308Chains N W
309309Chains N X
310310Chains N Y
311311Chains N Z
312312Chains N a
313313Chains N b
314314Chains N c
315315Chains N d
316316Chains O P
317317Chains O Q
318318Chains O R
319319Chains O S
320320Chains O T
321321Chains O U
322322Chains O V
323323Chains O W
324324Chains O X
325325Chains O Y
326326Chains O Z
327327Chains O a
328328Chains O b
329329Chains O c
330330Chains O d
331331Chains P Q
332332Chains P R
333333Chains P S
334334Chains P T
335335Chains P U
336336Chains P V
337337Chains P W
338338Chains P X
339339Chains P Y
340340Chains P Z
341341Chains P a
342342Chains P b
343343Chains P c
344344Chains P d
345345Chains Q R
346346Chains Q S
347347Chains Q T
348348Chains Q U
349349Chains Q V
350350Chains Q W
351351Chains Q X
352352Chains Q Y
353353Chains Q Z
354354Chains Q a
355355Chains Q b
356356Chains Q c
357357Chains Q d
358358Chains R S
359359Chains R T
360360Chains R U
361361Chains R V
362362Chains R W
363363Chains R X
364364Chains R Y
365365Chains R Z
366366Chains R a
367367Chains R b
368368Chains R c
369369Chains R d
370370Chains S T
371371Chains S U
372372Chains S V
373373Chains S W
374374Chains S X
375375Chains S Y
376376Chains S Z
377377Chains S a
378378Chains S b
379379Chains S c
380380Chains S d
381381Chains T U
382382Chains T V
383383Chains T W
384384Chains T X
385385Chains T Y
386386Chains T Z
387387Chains T a
388388Chains T b
389389Chains T c
390390Chains T d
391391Chains U V
392392Chains U W
393393Chains U X
394394Chains U Y
395395Chains U Z
396396Chains U a
397397Chains U b
398398Chains U c
399399Chains U d
400400Chains V W
401401Chains V X
402402Chains V Y
403403Chains V Z
404404Chains V a
405405Chains V b
406406Chains V c
407407Chains V d
408408Chains W X
409409Chains W Y
410410Chains W Z
411411Chains W a
412412Chains W b
413413Chains W c
414414Chains W d
415415Chains X Y
416416Chains X Z
417417Chains X a
418418Chains X b
419419Chains X c
420420Chains X d
421421Chains Y Z
422422Chains Y a
423423Chains Y b
424424Chains Y c
425425Chains Y d
426426Chains Z a
427427Chains Z b
428428Chains Z c
429429Chains Z d
430430Chains a b
431431Chains a c
432432Chains a d
433433Chains b c
434434Chains b d
435435Chains c d

NCS ensembles :
ID
1
2
3
4
5
6
7
8
9
10
11
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13
14
15
16
17
18
19
20
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47
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102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
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162
163
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166
167
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181
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185
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187
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274
275
276
277
278
279
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283
284
285
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295
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309
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355
356
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363
364
365
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416
417
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419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435

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Components

#1: Protein ...
Capsid protein VP1 /


Mass: 32043.629 Da / Num. of mol.: 30
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Finch polyomavirus / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: R4UMH0
#2: Chemical...
ChemComp-CL / CHLORIDE ION / Chloride


Mass: 35.453 Da / Num. of mol.: 71 / Source method: obtained synthetically / Formula: Cl
#3: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 751 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestN

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.7 Å3/Da / Density % sol: 54.43 %
Crystal growTemperature: 293 K / Method: vapor diffusion, hanging drop / pH: 7.5 / Details: HEPES, PEG 8000, ethylene glycol

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Data collection

DiffractionMean temperature: 93 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: SLS / Beamline: X06SA / Wavelength: 1.00001 Å
DetectorType: DECTRIS EIGER X 16M / Detector: PIXEL / Date: Dec 6, 2017
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.00001 Å / Relative weight: 1
ReflectionResolution: 2.618→48.07 Å / Num. obs: 274707 / % possible obs: 98.45 % / Redundancy: 3.9 % / Biso Wilson estimate: 55.5 Å2 / CC1/2: 0.993 / Rrim(I) all: 0.262 / Net I/σ(I): 6.11
Reflection shellResolution: 2.618→2.77 Å / Mean I/σ(I) obs: 1.03 / Num. unique obs: 42471 / CC1/2: 0.642 / Rrim(I) all: 0.156

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Processing

Software
NameVersionClassification
REFMAC5.8.0253refinement
XDSdata reduction
XDSdata scaling
PHASERphasing
Cootmodel building
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 4FMG
Resolution: 2.618→48.068 Å / Cor.coef. Fo:Fc: 0.91 / Cor.coef. Fo:Fc free: 0.875 / Cross valid method: FREE R-VALUE / ESU R: 0.962 / ESU R Free: 0.372
Details: Hydrogens have been added in their riding positions
RfactorNum. reflection% reflection
Rfree0.3003 2748 1 %
Rwork0.2698 --
all0.27 --
obs-274706 98.534 %
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å
Displacement parametersBiso mean: 50.781 Å2
Baniso -1Baniso -2Baniso -3
1--3.737 Å2-0 Å23.677 Å2
2--6.363 Å2-0 Å2
3----2.887 Å2
Refinement stepCycle: LAST / Resolution: 2.618→48.068 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms58950 0 71 751 59772
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.0060.01360514
X-RAY DIFFRACTIONr_bond_other_d0.0370.01751990
X-RAY DIFFRACTIONr_angle_refined_deg1.3731.64982804
X-RAY DIFFRACTIONr_angle_other_deg2.4491.566120763
X-RAY DIFFRACTIONr_dihedral_angle_1_deg7.1457905
X-RAY DIFFRACTIONr_dihedral_angle_2_deg36.75422.7242702
X-RAY DIFFRACTIONr_dihedral_angle_3_deg15.229158361
X-RAY DIFFRACTIONr_dihedral_angle_4_deg14.49615264
X-RAY DIFFRACTIONr_chiral_restr0.0550.28117
X-RAY DIFFRACTIONr_gen_planes_refined0.0060.0269510
X-RAY DIFFRACTIONr_gen_planes_other0.0090.0212486
X-RAY DIFFRACTIONr_nbd_refined0.1950.210974
X-RAY DIFFRACTIONr_symmetry_nbd_other0.2240.248951
X-RAY DIFFRACTIONr_nbtor_refined0.1630.229234
X-RAY DIFFRACTIONr_symmetry_nbtor_other0.0690.225388
X-RAY DIFFRACTIONr_xyhbond_nbd_refined0.1330.21636
X-RAY DIFFRACTIONr_symmetry_xyhbond_nbd_other0.1310.222
X-RAY DIFFRACTIONr_symmetry_nbd_refined0.2860.260
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X-RAY DIFFRACTIONr_ncsr_local_group_2890.0570.057368
X-RAY DIFFRACTIONr_ncsr_local_group_2900.0620.057374
X-RAY DIFFRACTIONr_ncsr_local_group_2910.0640.057015
X-RAY DIFFRACTIONr_ncsr_local_group_2920.0550.057145
X-RAY DIFFRACTIONr_ncsr_local_group_2930.0720.057274
X-RAY DIFFRACTIONr_ncsr_local_group_2940.0390.057314
X-RAY DIFFRACTIONr_ncsr_local_group_2950.0650.057129
X-RAY DIFFRACTIONr_ncsr_local_group_2960.0520.057276
X-RAY DIFFRACTIONr_ncsr_local_group_2970.0590.057326
X-RAY DIFFRACTIONr_ncsr_local_group_2980.0560.057223
X-RAY DIFFRACTIONr_ncsr_local_group_2990.060.057162
X-RAY DIFFRACTIONr_ncsr_local_group_3000.050.057461
X-RAY DIFFRACTIONr_ncsr_local_group_3010.0560.057275
X-RAY DIFFRACTIONr_ncsr_local_group_3020.0690.057421
X-RAY DIFFRACTIONr_ncsr_local_group_3030.0470.057417
X-RAY DIFFRACTIONr_ncsr_local_group_3040.0520.057500
X-RAY DIFFRACTIONr_ncsr_local_group_3050.060.057398
X-RAY DIFFRACTIONr_ncsr_local_group_3060.0630.057304
X-RAY DIFFRACTIONr_ncsr_local_group_3070.0610.057037
X-RAY DIFFRACTIONr_ncsr_local_group_3080.0640.057150
X-RAY DIFFRACTIONr_ncsr_local_group_3090.0540.057365
X-RAY DIFFRACTIONr_ncsr_local_group_3100.0370.057285
X-RAY DIFFRACTIONr_ncsr_local_group_3110.0710.057000
X-RAY DIFFRACTIONr_ncsr_local_group_3120.0530.057350
X-RAY DIFFRACTIONr_ncsr_local_group_3130.0520.057123
X-RAY DIFFRACTIONr_ncsr_local_group_3140.0480.057198
X-RAY DIFFRACTIONr_ncsr_local_group_3150.0510.057137
X-RAY DIFFRACTIONr_ncsr_local_group_3160.0490.057448
X-RAY DIFFRACTIONr_ncsr_local_group_3170.0690.057677
X-RAY DIFFRACTIONr_ncsr_local_group_3180.0510.057592
X-RAY DIFFRACTIONr_ncsr_local_group_3190.0550.057608
X-RAY DIFFRACTIONr_ncsr_local_group_3200.0520.057645
X-RAY DIFFRACTIONr_ncsr_local_group_3210.0610.057439
X-RAY DIFFRACTIONr_ncsr_local_group_3220.0670.057117
X-RAY DIFFRACTIONr_ncsr_local_group_3230.0650.057330
X-RAY DIFFRACTIONr_ncsr_local_group_3240.0650.057488
X-RAY DIFFRACTIONr_ncsr_local_group_3250.0370.057409
X-RAY DIFFRACTIONr_ncsr_local_group_3260.0710.057161
X-RAY DIFFRACTIONr_ncsr_local_group_3270.060.057479
X-RAY DIFFRACTIONr_ncsr_local_group_3280.0510.057232
X-RAY DIFFRACTIONr_ncsr_local_group_3290.0460.057317
X-RAY DIFFRACTIONr_ncsr_local_group_3300.0540.057246
X-RAY DIFFRACTIONr_ncsr_local_group_3310.0650.057552
X-RAY DIFFRACTIONr_ncsr_local_group_3320.0510.057478
X-RAY DIFFRACTIONr_ncsr_local_group_3330.0590.057459
X-RAY DIFFRACTIONr_ncsr_local_group_3340.0560.057490
X-RAY DIFFRACTIONr_ncsr_local_group_3350.0580.057476
X-RAY DIFFRACTIONr_ncsr_local_group_3360.0690.057118
X-RAY DIFFRACTIONr_ncsr_local_group_3370.0640.057189
X-RAY DIFFRACTIONr_ncsr_local_group_3380.070.057362
X-RAY DIFFRACTIONr_ncsr_local_group_3390.040.057364
X-RAY DIFFRACTIONr_ncsr_local_group_3400.0590.057287
X-RAY DIFFRACTIONr_ncsr_local_group_3410.0580.057425
X-RAY DIFFRACTIONr_ncsr_local_group_3420.0550.057348
X-RAY DIFFRACTIONr_ncsr_local_group_3430.0560.057279
X-RAY DIFFRACTIONr_ncsr_local_group_3440.0660.057174
X-RAY DIFFRACTIONr_ncsr_local_group_3450.0690.057615
X-RAY DIFFRACTIONr_ncsr_local_group_3460.0780.057624
X-RAY DIFFRACTIONr_ncsr_local_group_3470.0660.057745
X-RAY DIFFRACTIONr_ncsr_local_group_3480.0670.057552
X-RAY DIFFRACTIONr_ncsr_local_group_3490.0770.057232
X-RAY DIFFRACTIONr_ncsr_local_group_3500.0820.057338
X-RAY DIFFRACTIONr_ncsr_local_group_3510.0790.057538
X-RAY DIFFRACTIONr_ncsr_local_group_3520.0610.057457
X-RAY DIFFRACTIONr_ncsr_local_group_3530.070.057322
X-RAY DIFFRACTIONr_ncsr_local_group_3540.0590.057693
X-RAY DIFFRACTIONr_ncsr_local_group_3550.0750.057294
X-RAY DIFFRACTIONr_ncsr_local_group_3560.0690.057336
X-RAY DIFFRACTIONr_ncsr_local_group_3570.0780.057270
X-RAY DIFFRACTIONr_ncsr_local_group_3580.0570.057557
X-RAY DIFFRACTIONr_ncsr_local_group_3590.0510.057588
X-RAY DIFFRACTIONr_ncsr_local_group_3600.0670.057447
X-RAY DIFFRACTIONr_ncsr_local_group_3610.0620.057167
X-RAY DIFFRACTIONr_ncsr_local_group_3620.0630.057282
X-RAY DIFFRACTIONr_ncsr_local_group_3630.0680.057429
X-RAY DIFFRACTIONr_ncsr_local_group_3640.0360.057517
X-RAY DIFFRACTIONr_ncsr_local_group_3650.0710.057236
X-RAY DIFFRACTIONr_ncsr_local_group_3660.0540.057460
X-RAY DIFFRACTIONr_ncsr_local_group_3670.0530.057407
X-RAY DIFFRACTIONr_ncsr_local_group_3680.0570.057329
X-RAY DIFFRACTIONr_ncsr_local_group_3690.0560.057290
X-RAY DIFFRACTIONr_ncsr_local_group_3700.0580.057705
X-RAY DIFFRACTIONr_ncsr_local_group_3710.0710.057473
X-RAY DIFFRACTIONr_ncsr_local_group_3720.0760.057101
X-RAY DIFFRACTIONr_ncsr_local_group_3730.0730.057356
X-RAY DIFFRACTIONr_ncsr_local_group_3740.0660.057567
X-RAY DIFFRACTIONr_ncsr_local_group_3750.0440.057403
X-RAY DIFFRACTIONr_ncsr_local_group_3760.0740.057241
X-RAY DIFFRACTIONr_ncsr_local_group_3770.0570.057550
X-RAY DIFFRACTIONr_ncsr_local_group_3780.0560.057313
X-RAY DIFFRACTIONr_ncsr_local_group_3790.0560.057380
X-RAY DIFFRACTIONr_ncsr_local_group_3800.0610.057328
X-RAY DIFFRACTIONr_ncsr_local_group_3810.0650.057438
X-RAY DIFFRACTIONr_ncsr_local_group_3820.0740.057187
X-RAY DIFFRACTIONr_ncsr_local_group_3830.0730.057318
X-RAY DIFFRACTIONr_ncsr_local_group_3840.0770.057484
X-RAY DIFFRACTIONr_ncsr_local_group_3850.0430.057422
X-RAY DIFFRACTIONr_ncsr_local_group_3860.0680.057223
X-RAY DIFFRACTIONr_ncsr_local_group_3870.0640.057574
X-RAY DIFFRACTIONr_ncsr_local_group_3880.0640.057221
X-RAY DIFFRACTIONr_ncsr_local_group_3890.060.057321
X-RAY DIFFRACTIONr_ncsr_local_group_3900.0620.057280
X-RAY DIFFRACTIONr_ncsr_local_group_3910.0710.057112
X-RAY DIFFRACTIONr_ncsr_local_group_3920.0790.057142
X-RAY DIFFRACTIONr_ncsr_local_group_3930.0740.057371
X-RAY DIFFRACTIONr_ncsr_local_group_3940.060.057321
X-RAY DIFFRACTIONr_ncsr_local_group_3950.070.057278
X-RAY DIFFRACTIONr_ncsr_local_group_3960.0720.057371
X-RAY DIFFRACTIONr_ncsr_local_group_3970.0610.057342
X-RAY DIFFRACTIONr_ncsr_local_group_3980.0630.057303
X-RAY DIFFRACTIONr_ncsr_local_group_3990.0680.057271
X-RAY DIFFRACTIONr_ncsr_local_group_4000.0770.057019
X-RAY DIFFRACTIONr_ncsr_local_group_4010.0780.057032
X-RAY DIFFRACTIONr_ncsr_local_group_4020.0570.057053
X-RAY DIFFRACTIONr_ncsr_local_group_4030.0770.056900
X-RAY DIFFRACTIONr_ncsr_local_group_4040.0680.057061
X-RAY DIFFRACTIONr_ncsr_local_group_4050.0730.056972
X-RAY DIFFRACTIONr_ncsr_local_group_4060.0720.056881
X-RAY DIFFRACTIONr_ncsr_local_group_4070.0710.056987
X-RAY DIFFRACTIONr_ncsr_local_group_4080.0730.057228
X-RAY DIFFRACTIONr_ncsr_local_group_4090.0590.057188
X-RAY DIFFRACTIONr_ncsr_local_group_4100.0740.056962
X-RAY DIFFRACTIONr_ncsr_local_group_4110.0630.057238
X-RAY DIFFRACTIONr_ncsr_local_group_4120.0650.057044
X-RAY DIFFRACTIONr_ncsr_local_group_4130.0630.056961
X-RAY DIFFRACTIONr_ncsr_local_group_4140.0660.057082
X-RAY DIFFRACTIONr_ncsr_local_group_4150.0590.057298
X-RAY DIFFRACTIONr_ncsr_local_group_4160.0850.057087
X-RAY DIFFRACTIONr_ncsr_local_group_4170.0710.057384
X-RAY DIFFRACTIONr_ncsr_local_group_4180.0690.057191
X-RAY DIFFRACTIONr_ncsr_local_group_4190.0650.057260
X-RAY DIFFRACTIONr_ncsr_local_group_4200.070.057183
X-RAY DIFFRACTIONr_ncsr_local_group_4210.070.057131
X-RAY DIFFRACTIONr_ncsr_local_group_4220.0480.057327
X-RAY DIFFRACTIONr_ncsr_local_group_4230.0480.057249
X-RAY DIFFRACTIONr_ncsr_local_group_4240.0460.057199
X-RAY DIFFRACTIONr_ncsr_local_group_4250.0520.057202
X-RAY DIFFRACTIONr_ncsr_local_group_4260.0630.057243
X-RAY DIFFRACTIONr_ncsr_local_group_4270.0660.057170
X-RAY DIFFRACTIONr_ncsr_local_group_4280.070.057081
X-RAY DIFFRACTIONr_ncsr_local_group_4290.0760.057004
X-RAY DIFFRACTIONr_ncsr_local_group_4300.0620.057188
X-RAY DIFFRACTIONr_ncsr_local_group_4310.0610.057221
X-RAY DIFFRACTIONr_ncsr_local_group_4320.0640.057147
X-RAY DIFFRACTIONr_ncsr_local_group_4330.0650.057176
X-RAY DIFFRACTIONr_ncsr_local_group_4340.0530.057180
X-RAY DIFFRACTIONr_ncsr_local_group_4350.0640.057110
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 20

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRfactor allNum. reflection allFsc freeFsc work% reflection obs (%)WRfactor Rwork
2.618-2.6860.4551950.464192270.464204980.2250.23794.75070.457
2.686-2.7590.451960.426194630.426198420.390.40699.07770.412
2.759-2.8390.4371920.397190190.397193770.4670.50499.14330.379
2.839-2.9260.3491870.379184470.379188130.5990.60399.04850.357
2.926-3.0220.3771810.353179540.353183350.6470.6798.90920.329
3.022-3.1270.3511750.314173270.315176260.7210.73699.29650.287
3.127-3.2450.3171700.283168110.283171050.7910.82499.27510.256
3.245-3.3770.3091630.273161930.273164470.820.84199.44670.249
3.377-3.5260.2771580.254155730.254158020.8570.87399.55070.231
3.526-3.6970.2541500.241148480.241150850.8990.89399.42330.219
3.697-3.8960.2561430.232141430.232143680.9010.90599.42930.209
3.896-4.1310.2351350.213133670.213136200.910.92499.13360.193
4.131-4.4140.231260.193125560.193128360.9330.94198.80020.177
4.414-4.7640.2751170.21115590.21119770.8980.92697.48680.19
4.764-5.2130.2941010.22499950.225110070.8960.9291.72340.204
5.213-5.820.2921000.23998670.2499980.8990.92199.68990.219
5.82-6.7040.288880.25587650.25588800.9070.91799.69590.237
6.704-8.1710.228760.24874970.24876050.9230.92299.57920.241
8.171-11.3930.322590.25958800.25959620.8890.92199.61420.263
11.393-48.0680.368360.33834680.33835520.8510.88798.64870.361

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