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TitleBroad ultra-potent neutralization of SARS-CoV-2 variants by monoclonal antibodies specific to the tip of RBD.
Journal, issue, pagesCell Discov, Vol. 8, Issue 1, Page 16, Year 2022
Publish dateFeb 15, 2022
AuthorsHang Ma / Yingying Guo / Haoneng Tang / Chien-Te K Tseng / Lei Wang / Huifang Zong / Zhenyu Wang / Yang He / Yunsong Chang / Shusheng Wang / Haiqiu Huang / Yong Ke / Yunsheng Yuan / Mingyuan Wu / Yuanyuan Zhang / Aleksandra Drelich / Kempaiah Rayavara Kempaiah / Bi-Hung Peng / Ailin Wang / Kaiyong Yang / Haiyang Yin / Junjun Liu / Yali Yue / Wenbo Xu / Shuangli Zhu / Tianjiao Ji / Xiaoju Zhang / Ziqi Wang / Gang Li / Guangchun Liu / Jingjing Song / Lingling Mu / ZongShang Xiang / Zhangyi Song / Hua Chen / Yanlin Bian / Baohong Zhang / Hui Chen / Jiawei Zhang / Yunji Liao / Li Zhang / Li Yang / Yi Chen / John Gilly / Xiaodong Xiao / Lei Han / Hua Jiang / Yueqing Xie / Qiang Zhou / Jianwei Zhu /
PubMed AbstractSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) continue to wreak havoc across the globe. Higher transmissibility and immunologic resistance of VOCs bring ...Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern (VOCs) continue to wreak havoc across the globe. Higher transmissibility and immunologic resistance of VOCs bring unprecedented challenges to epidemic extinguishment. Here we describe a monoclonal antibody, 2G1, that neutralizes all current VOCs and has surprising tolerance to mutations adjacent to or within its interaction epitope. Cryo-electron microscopy structure showed that 2G1 bound to the tip of receptor binding domain (RBD) of spike protein with small contact interface but strong hydrophobic effect, which resulted in nanomolar to sub-nanomolar affinities to spike proteins. The epitope of 2G1 on RBD partially overlaps with angiotensin converting enzyme 2 (ACE2) interface, which enables 2G1 to block interaction between RBD and ACE2. The narrow binding epitope but high affinity bestow outstanding therapeutic efficacy upon 2G1 that neutralized VOCs with sub-nanomolar half maximal inhibitory concentration in vitro. In SARS-CoV-2, Beta or Delta variant-challenged transgenic mice and rhesus macaque models, 2G1 protected animals from clinical illness and eliminated viral burden, without serious impact to animal safety. Mutagenesis experiments suggest that 2G1 is potentially capable of dealing with emerging SARS-CoV-2 variants in the future. This report characterized the therapeutic antibodies specific to the tip of spike against SARS-CoV-2 variants and highlights the potential clinical applications as well as for developing vaccine and cocktail therapy.
External linksCell Discov / PubMed:35169121 / PubMed Central
MethodsEM (single particle)
Resolution2.7 - 3.2 Å
Structure data

32920

7x08

EMDB-32920, PDB-7x08:
S protein of SARS-CoV-2 in complex with 2G1
Method: EM (single particle) / Resolution: 2.7 Å

EMDB-32921:
S protein of SARS-CoV-2 in complex with 2G1 focused on RBD_2G1 sub-complex
Method: EM (single particle) / Resolution: 3.2 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose / N-Acetylglucosamine

ChemComp-EIC:
LINOLEIC ACID / Linoleic acid

Source
  • severe acute respiratory syndrome coronavirus
  • homo sapiens (human)
KeywordsVIRAL PROTEIN/IMMUNE SYSTEM / SARS-CoV-2 / VIRAL PROTEIN / VIRAL PROTEIN-IMMUNE SYSTEM complex

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