[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 558 items for (author: hyun & j)

EMDB-29330:
N332-GT5 SOSIP in complex with base polyclonal Fabs isolated at day 42 from protein immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29333:
N332-GT5 SOSIP in complex with base polyclonal Fabs isolated at day 42 from protein immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29334:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 16 from mRNA immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29335:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 42 from mRNA immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-43191:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 14 from N332-GT2 nanoparticle-immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-43192:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 15 from N332-GT5 nanoparticle-immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-28941:
HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab
Method: single particle / : Torres JL, Ozorowski G, Ward AB

EMDB-28942:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-28945:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized wild type mice, and NHP monoclonal Fab RM20A3
Method: single particle / : Ozorowski G, Ward AB

EMDB-43190:
HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8f92:
HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab
Method: single particle / : Torres JL, Ozorowski G, Ward AB

PDB-8f9g:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8f9m:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized wild type mice, and NHP monoclonal Fab RM20A3
Method: single particle / : Ozorowski G, Ward AB

PDB-8vfv:
HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41024:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41025:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41026:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41027:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41034:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41035:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t49:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4a:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4b:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4d:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4k:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4l:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-42478:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

PDB-8uqv:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

EMDB-35377:
Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35378:
Cryo-EM structure of miniGo-scFv16 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35380:
Cryo-EM structure of GPR156-miniGo-scFv16 complex
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35382:
Cryo-EM structure of GPR156A/B of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35389:
Cryo-EM structure of GPR156C/D of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35390:
Cryo-EM structure of G-protein free GPR156
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ieb:
Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iec:
Cryo-EM structure of miniGo-scFv16 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ied:
Cryo-EM structure of GPR156-miniGo-scFv16 complex
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iei:
Cryo-EM structure of GPR156A/B of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8iep:
Cryo-EM structure of GPR156C/D of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

PDB-8ieq:
Cryo-EM structure of G-protein free GPR156
Method: single particle / : Shin J, Park J, Cho Y

EMDB-29046:
Wildtype rat TRPV2 in nanodiscs bound to RR
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

EMDB-29047:
Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

EMDB-29048:
RR-bound wildtype rabbit TRPV5 in nanodiscs
Method: single particle / : Fluck EC, De Jesus-Perez JJ, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

EMDB-29051:
Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red
Method: single particle / : De Jesus-Perez JJ, Fluck EC, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

PDB-8ffl:
Wildtype rat TRPV2 in nanodiscs bound to RR
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

PDB-8ffm:
Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

PDB-8ffn:
RR-bound wildtype rabbit TRPV5 in nanodiscs
Method: single particle / : Fluck EC, De Jesus-Perez JJ, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

PDB-8ffq:
Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red
Method: single particle / : De Jesus-Perez JJ, Fluck EC, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

EMDB-35234:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-35235:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more