[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 187 items for (author: shi & zz)

EMDB-43753:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Method: single particle / : Shi SS, Kuang ZL, Zhao R

PDB-8w2o:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Method: single particle / : Shi SS, Kuang ZL, Zhao R

EMDB-19431:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)
Method: single particle / : Mazza T, Beis K

EMDB-19433:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid
Method: single particle / : Mazza T, Beis K

PDB-8rq3:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)
Method: single particle / : Mazza T, Beis K

PDB-8rq4:
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid
Method: single particle / : Mazza T, Beis K

EMDB-43033:
Structure of 80alpha portal protein expressed in E. coli
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

EMDB-43142:
SaPI1 mature capsid structure containing DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

EMDB-43143:
SaPI1 mature capsid structure without DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

EMDB-43145:
SaPI1 portal structure in mature capsids containing DNA
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

EMDB-43146:
SaPI1 portal structure in mature capsids without DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

EMDB-43147:
SaPI1 portal-capsid interface in mature capsids with DNA
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

PDB-8v8b:
Structure of 80alpha portal protein expressed in E. coli
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

PDB-8vd4:
SaPI1 mature capsid structure containing DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

PDB-8vd5:
SaPI1 mature capsid structure without DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

PDB-8vd8:
SaPI1 portal structure in mature capsids containing DNA
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

PDB-8vdc:
SaPI1 portal structure in mature capsids without DNA
Method: single particle / : Mukherjee A, Kizziah JL, Dokland T

PDB-8vde:
SaPI1 portal-capsid interface in mature capsids with DNA
Method: single particle / : Kizziah JL, Mukherjee A, Dokland T

EMDB-36896:
Structure of the Dimeric Human CNTN2 Ig 1-6-FNIII 1-2 Domain in an Asymmetric State
Method: single particle / : Zhang ZZ

EMDB-41153:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-41154:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcf:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcg:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8afz:
Architecture of the ESCPE-1 membrane coat
Method: subtomogram averaging / : Lopez-Robles C, Scaramuzza S, Astorga-Simon E, Ishida M, Williamsom CD, Banos-Mateos S, Gil-Carton D, Romero M, Vidaurrazaga A, Fernandez-Recio J, Rojas AL, Bonifacino JS, Castano-Diez D, Hierro A

EMDB-29101:
EGFR:Degrader:VHL:Elongin-B/C:Cul2
Method: single particle / : Rosenberg SC

EMDB-28092:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-093
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28090:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-040
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28091:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-045
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28093:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-156
Method: single particle / : Shek J, Callaway H, Li H, Yu X, Saphire EO

EMDB-28094:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-234
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28095:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-260
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28096:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-279
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28097:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-290
Method: single particle / : Yu X, Callaway H, Li H, Shek J, Saphire EO

EMDB-28098:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-294
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28099:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-295
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28100:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-299
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28102:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-334
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28103:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-360
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28104:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-361
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28105:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-362
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28106:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-368
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28168:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-292
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28169:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-333
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28170:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-355
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28171:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-371
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-25706:
Cryo-EM structure of human SIMC1-SLF2 complex
Method: single particle / : Maeda S, Oravcova M, Boddy MN, Otomo T

PDB-7t5p:
Cryo-EM structure of human SIMC1-SLF2 complex
Method: single particle / : Maeda S, Oravcova M, Boddy MN, Otomo T

EMDB-27779:
Structure of the SARS-CoV-2 spike glycoprotein S2 subunit
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8dya:
Structure of the SARS-CoV-2 spike glycoprotein S2 subunit
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more