[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 50 items for (author: arnaud & ca)

EMDB-14733:
Tail tip of siphophage T5 : tip proteins
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14790:
Tail tip of siphophage T5 : central fibre
Method: single particle / : Linares R, Arnaud CA, Effantin G, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14799:
Tail tip of siphophage T5 : full complex after interaction with its bacterial receptor FhuA
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14800:
Tail tip of siphophage T5 : bent fibre after interaction with its bacterial receptor FhuA
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14869:
Tail tip of siphophage T5 : full structure
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14873:
Tail tip of siphophage T5 : open cone after interaction with bacterial receptor FhuA
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-13953:
Tail tip of siphophage T5 : common core proteins
Method: single particle / : Linares R, Arnaud CA, Effantin G, Darnault C, Epalle N, Boeri Erba E, Schoehn G, Breyton C

EMDB-14678:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1)
Method: single particle / : Fernandes CAH, Venien-Bryan C, Fagnen C, Zuniga D

PDB-7zdz:
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1)
Method: single particle / : Fernandes CAH, Venien-Bryan C, Fagnen C, Zuniga D

EMDB-13095:
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg
Method: single particle / : Gobet A, Schoehn G, Falson P, Chaptal V

PDB-7ow8:
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg
Method: single particle / : Gobet A, Schoehn G, Falson P, Chaptal V

EMDB-12170:
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM
Method: single particle / : Wiseman B, Chaptal V, Zampieri V, Magnard S, Hogbom M, Falson P

PDB-7bg4:
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM
Method: single particle / : Wiseman B, Chaptal V, Zampieri V, Magnard S, Hogbom M, Falson P

EMDB-11273:
Open-open state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

EMDB-11274:
Closed-closed state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

EMDB-11277:
Open-closed state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

PDB-6zlt:
Open-open state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

PDB-6zlu:
Closed-closed state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

PDB-6zm1:
Open-closed state of the Bt1762-Bt1763 levan transport system
Method: single particle / : White JBR, van den Berg B, Ranson NA

EMDB-10241:
Structure of the RagAB peptide importer in the 'closed-closed' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

EMDB-10243:
Structure of the RagAB peptide importer in the 'open-open' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

EMDB-10245:
Structure of the RagAB peptide importer in the 'open-closed' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

PDB-6sm3:
Structure of the RagAB peptide importer in the 'closed-closed' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

PDB-6sml:
Structure of the RagAB peptide importer in the 'open-open' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

PDB-6smq:
Structure of the RagAB peptide importer in the 'open-closed' state
Method: single particle / : White JBR, Ranson NA, van den Berg B

EMDB-4749:
Multidrug resistance transporter BmrA mutant E504A bound with ATP and Mg solved by Cryo-EM
Method: single particle / : Wiseman B, Chaptal V, Zampieri V, Magnard S, Hogbom M, Falson P

PDB-6r81:
Multidrug resistance transporter BmrA mutant E504A bound with ATP and Mg solved by Cryo-EM
Method: single particle / : Wiseman B, Chaptal V, Zampieri V, Magnard S, Hogbom M, Falson P

EMDB-10401:
Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi
Method: single particle / : Madru C, Raia P, Hugonneau Beaufet I, Pehau-Arnaudet G, England P, Lindhal E, Delarue M, Carroni M, Sauguet L

PDB-6t8h:
Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi
Method: single particle / : Madru C, Raia P, Hugonneau Beaufet I, Pehau-Arnaudet G, England P, Lindhal E, Delarue M, Carroni M, Sauguet L

EMDB-0244:
Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA
Method: single particle / : Raia P, Carroni M

PDB-6hms:
Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA
Method: single particle / : Raia P, Carroni M, Sauguet L

EMDB-3689:
Full T5 tail containing pb2
Method: helical / : Arnaud C, Effantin G, Vives C, Engilberge S, Bacia M, Boulanger P, Girard E, Schoehn G, Breyton C

EMDB-3690:
Empty T5 tail
Method: helical / : Arnaud C, Effantin G, Vives C, Engilberge S, Bacia M, Boulanger P, Girard E, Schoehn G, Breyton C

EMDB-3691:
T5 pb6 tubes
Method: helical / : Arnaud C, Effantin G, Vives C, Engilberge S, Bacia M, Boulanger P, Girard E, Schoehn G, Breyton C

EMDB-3692:
T5 tail - All data combined together
Method: helical / : Arnaud C, Effantin G, Vives C, Engilberge S, Bacia M, Boulanger P, Girard E, Schoehn G, Breyton C

EMDB-4187:
EM map of HasR, a TonB dependent receptor from Serratia marcescens in complex with the hemophore HasA and heme.
Method: single particle / : Prochnicka-Chalufour A, Wojtowicz H, Pehau-Arnaudet G, Gubellini F, Fronzes R, Izadi-Pruneyre N

EMDB-3978:
EM map of HasR, a TonB dependent hemophore receptor from Serratia marcescens.
Method: single particle / : Prochnicka-Chalufour A, Wojtowicz H, Pehau Arnaudet G, Gubellini F, Fronzes R, Pruneyre-Izadi N

EMDB-3705:
Full length human cytoplasmic dynein-1 in the phi-particle conformation
Method: single particle / : Zhang K, Foster HE, Carter AP

PDB-5nvu:
Full length human cytoplasmic dynein-1 in the phi-particle conformation
Method: single particle / : Zhang K, Foster HE, Carter AP

EMDB-3706:
Human cytoplasmic dynein-1 bound to dynactin and an N-terminal construct of BICD2
Method: single particle / : Zhang K, Foster HE, Carter AP

PDB-5nw4:
Human cytoplasmic dynein-1 bound to dynactin and an N-terminal construct of BICD2
Method: single particle / : Zhang K, Foster HE, Carter AP

EMDB-3698:
motor domain of complete human dynein-1 in the state of phi-particle
Method: single particle / : Zhang K, Foster H

EMDB-3703:
Human cytoplasmic dynein-1 tail in the twisted state
Method: single particle / : Zhang K

EMDB-3704:
Human cytoplasmic dynein-1 tail in the parallel state
Method: single particle / : Zhang K, Foster HE, Carter AP

EMDB-3707:
Locally refined human cytoplasmic dynein-1 tail bound to dynactin and an N-terminal construct of BICD2
Method: single particle / : Zhang K, Foster HE, Carter AP

PDB-5nug:
Motor domains from human cytoplasmic dynein-1 in the phi-particle conformation
Method: single particle / : Zhang K, Foster HE, Carter AP

PDB-5nvs:
Human cytoplasmic dynein-1 tail in the twisted N-terminus state
Method: single particle / : Zhang K, Foster HE, Carter AP

EMDB-2928:
Negative stain structure of a type 6 secretion system membrane core complex
Method: single particle / : Durand E, Fronzes R

EMDB-2927:
Negative stain structure of a type 6 secretion system membrane core complex
Method: single particle / : Durand E, Fronzes R

EMDB-2750:
Structure of the CsgG-CsgE complex
Method: single particle / : Krasteva PV, Gubellini F, Remaut H, Fronzes R

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more