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- SASDEU3: GST-SAUL1 (Senescence-associated E3 ubiquitin ligase 1, SAUL1 + G... -

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ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDEU3
SampleGST-SAUL1
  • Senescence-associated E3 ubiquitin ligase 1 (protein), SAUL1, Arabidopsis thaliana
  • Glutathione S-transferase (protein), GST, Schistosoma japonicum
Function / homology
Function and homology information


regulation of abscisic acid biosynthetic process / regulation of chlorophyll catabolic process / negative regulation of abscisic acid biosynthetic process / transmembrane receptor protein serine/threonine kinase binding / regulation of chlorophyll biosynthetic process / leaf senescence / glutathione transferase / glutathione transferase activity / RING-type E3 ubiquitin transferase / ubiquitin-protein transferase activity ...regulation of abscisic acid biosynthetic process / regulation of chlorophyll catabolic process / negative regulation of abscisic acid biosynthetic process / transmembrane receptor protein serine/threonine kinase binding / regulation of chlorophyll biosynthetic process / leaf senescence / glutathione transferase / glutathione transferase activity / RING-type E3 ubiquitin transferase / ubiquitin-protein transferase activity / protein ubiquitination / nucleus / plasma membrane / cytoplasm
Similarity search - Function
PUB protein, U-box domain, plant / U-box domain / U-box domain profile. / Modified RING finger domain / U-box domain / Glutathione S-transferase, C-terminal domain / Armadillo/plakoglobin ARM repeat profile. / Armadillo/beta-catenin-like repeat / Armadillo/beta-catenin-like repeats / Armadillo ...PUB protein, U-box domain, plant / U-box domain / U-box domain profile. / Modified RING finger domain / U-box domain / Glutathione S-transferase, C-terminal domain / Armadillo/plakoglobin ARM repeat profile. / Armadillo/beta-catenin-like repeat / Armadillo/beta-catenin-like repeats / Armadillo / Glutathione S-transferase, N-terminal domain / Glutathione transferase family / Glutathione S-transferase, C-terminal / Soluble glutathione S-transferase N-terminal domain profile. / Glutathione S-transferase, C-terminal-like / Soluble glutathione S-transferase C-terminal domain profile. / Glutathione S-transferase, N-terminal / Glutathione S-transferase, C-terminal domain superfamily / Armadillo-like helical / Thioredoxin-like superfamily / Armadillo-type fold / Zinc finger, RING/FYVE/PHD-type
Similarity search - Domain/homology
Glutathione S-transferase class-mu 26 kDa isozyme / U-box domain-containing protein 44
Similarity search - Component
Biological speciesArabidopsis thaliana (thale cress)
Schistosoma japonicum (invertebrata)
Contact author
  • Al Kikhney (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #1458
Type: mix / Software: (05) / Radius of dummy atoms: 1.90 A / Symmetry: P222 / Chi-square value: 0.682 / P-value: 0.950757
Model #1289
Type: dummy / Radius of dummy atoms: 6.10 A / Symmetry: P222 / Chi-square value: 0.720 / P-value: 0.321151

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Sample

SampleName: GST-SAUL1 / Specimen concentration: 1 mg/ml / Entity id: 670 / 687
BufferName: 50 mM Tris, 250 mM NaCl / pH: 9
Entity #670Name: SAUL1 / Type: protein / Description: Senescence-associated E3 ubiquitin ligase 1 / Formula weight: 88.79 / Num. of mol.: 4 / Source: Arabidopsis thaliana / References: UniProt: Q9LM76
Sequence: GPLGSMVGSS DGDQSDDSSH FERGVDHIYE AFICPLTKEV MHDPVTLENG RTFEREAIEK WFKECRDSGR PPSCPLTSQE LTSTDVSASI ALRNTIEEWR SRNDAAKLDI ARQSLFLGNA ETDILQALMH VRQICRTIRS NRHGVRNSQL IHMIIDMLKS TSHRVRYKAL ...Sequence:
GPLGSMVGSS DGDQSDDSSH FERGVDHIYE AFICPLTKEV MHDPVTLENG RTFEREAIEK WFKECRDSGR PPSCPLTSQE LTSTDVSASI ALRNTIEEWR SRNDAAKLDI ARQSLFLGNA ETDILQALMH VRQICRTIRS NRHGVRNSQL IHMIIDMLKS TSHRVRYKAL QTLQVVVEGD DESKAIVAEG DTVRTLVKFL SHEPSKGREA AVSLLFELSK SEALCEKIGS IHGALILLVG LTSSNSENVS IVEKADRTLE NMERSEEIVR QMASYGRLQP LLGKLLEGSP ETKLSMASFL GELPLNNDVK VLVAQTVGSS LVDLMRSGDM PQREAALKAL NKISSFEGSA KVLISKGILP PLIKDLFYVG PNNLPIRLKE VSATILANIV NIGYDFDKAT LVSENRVENL LHLISNTGPA IQCKLLEVLV GLTSCPKTVP KVVYAIKTSG AIISLVQFIE VRENDDLRLA SIKLLHNLSP FMSEELAKAL CGTAGQLGSL VAIISEKTPI TEEQAAAAGL LAELPDRDLG LTQEMLEVGA FEKIISKVFG IRQGDIKGMR FVNPFLEGLV RILARITFVF NKEARAINFC REHDVASLFL HLLQSNGQDN IQMVSAMALE NLSLESIKLT RMPDPPPVNY CGSIFSCVRK PHVVNGLCKI HQGICSLRET FCLVEGGAVE KLVALLDHEN VKVVEAALAA LSSLLEDGLD VEKGVKILDE ADGIRHILNV LRENRTERLT RRAVWMVERI LRIEDIAREV AEEQSLSAAL VDAFQNADFR TRQIAENALK HIDKIPNFSS IFPNIA
Entity #687Name: GST / Type: protein / Description: Glutathione S-transferase / Formula weight: 26.43 / Num. of mol.: 4 / Source: Schistosoma japonicum / References: UniProt: P08515
Sequence: MSPILGYWKI KGLVQPTRLL LEYLEEKYEE HLYERDEGDK WRNKKFELGL EFPNLPYYID GDVKLTQSMA IIRYIADKHN MLGGCPKERA EISMLEGAVL DIRYGVSRIA YSKDFETLKV DFLSKLPEML KMFEDRLCHK TYLNGDHVTH PDFMLYDALD VVLYMDPMCL ...Sequence:
MSPILGYWKI KGLVQPTRLL LEYLEEKYEE HLYERDEGDK WRNKKFELGL EFPNLPYYID GDVKLTQSMA IIRYIADKHN MLGGCPKERA EISMLEGAVL DIRYGVSRIA YSKDFETLKV DFLSKLPEML KMFEDRLCHK TYLNGDHVTH PDFMLYDALD VVLYMDPMCL DAFPKLVCFK KRIEAIPQID KYLKSSKYIA WPLQGWQATF GGGDHPPKSD LEVLFQ

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Experimental information

BeamInstrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.123956 Å / Dist. spec. to detc.: 3 mm
DetectorName: Pilatus 2M
Scan
Title: GST-SAUL1 / Measurement date: Jan 20, 2014 / Storage temperature: 20 °C / Cell temperature: 23 °C / Exposure time: 0.05 sec. / Number of frames: 20 / Unit: 1/nm /
MinMax
Q0.0199 4.5094
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 401 /
MinMax
Q0.0410132 1.09487
P(R) point1 401
R0 28
Result
Type of curve: single_conc /
ExperimentalPorod
MW486 kDa486 kDa
Volume-778.34 nm3

P(R)GuinierP(R) errorGuinier error
Forward scattering, I01720 1734.36 --
Radius of gyration, Rg7.762 nm7.63 nm0.148 0.96

MinMax
D-28
Guinier point9 53

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