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PDBj (Protein Data Bank Japan) maintains a centralized archive of macromolecular structures and provides integrated tools, in collaboration with the RCSB in USA and the MSD-EBI in EU. PDBj is supported by JST-BIRD.

Announcement for Release of Remediated PDB data

31-July-2007

Remediated PDB Archive Released

The PDB archive has been remediated by the wwPDB. It is available at ftp://ftp.wwpdb.org.

All data in the PDB archive reflects the new features incorporated as part of this wwPDB remediation project, including standardized IUPAC nomenclature for chemical components. Users may have to download new software to view the files with the new nomenclature (e.g., RasMol, Chimera). Please see http://remediation.wwpdb.org/software.html for details.

A snapshot of the unremediated PDB archive (as of July 31, 2007) will be available at ftp://ftp.rcsb.org.

Many thanks to the PDB community for all of the feedback on this project.