• ADIT: PDB Deposition
• ADIT-NMR

• Search PDB (Mine/xPSSS)
• PDB/RDF, chem_comp/RDF
• Latest Release Search
• Sequence-Navigator
• Structure-Navigator
• SeSAW
• Ligand Binding Sites (GIRAF)
• EM Navigator
• Search NMR Data (BMRB)
• Status Search

• jV: Graphic Viewer
• Yorodumi
• Protein Globe
• ASH
• MAFFTash
• SEALA

• CRNPRED
• Spanner
• SFAS

• eF-site/eF-seek/eF-surf
• eProtS
• ProMode / ProMode Elastic / ProMode Oligomer
• Molecule of the Month

• PDB Archive/Snapshot Archive

日本蛋白质结构数据库（PDBj: Protein Data Bank Japan), 由JST-NBDC和大阪大学提供支援，与美国的RCSB, BMRB和欧洲PDBe共同合作，在对国际性的生物大分子立体结构数据库的PDB档案文件进行维护的同时，还提供各种结构解析的应用工具。

PDB登记

NMR数据登记

PDB搜索	NMR数据搜索
PDB ID or Keyword sequence author name (longer than 5 residues) (e.g.) KGFEPLIQFA ("Family name, Initial of Given name") (e.g.) Ito, N. 高级搜索 >>	Accession number Deposition code

3-Feb-2012

For system maintenance, all the data of PDB and EMDB will be unavailable from 9:00 a.m. to 10:00 a.m. on 2/10(Fri). PDBj services which refer these data won't work in the period. We are sorry to your inconvenient.

20-Dec-2011

EM Data Bank to join the PDB archive
The EM Data Bank (EMDB), the primary archive for experimentally-determined maps obtained using three-dimensional electron microscopy methods, will join the PDB archive on 7 March 2012. (wwPDB News...)

18-Aug-2011

PDB/RDF service has started. For more details, please refer to the help page.

13-July-2011

New PDBMLplus schema (PDBMLplus_v40.xsd) has been released. For more details, please refer to the help page.

13-July-2011

The latest version of jV (jV4.0) has been released, supporting the new version of PDBML format (ver 4.0). Please note that the older version of jV may not be able to parse the new PDBML data (v4.0). Please download the newest version from here.

13-July-2011

PDB Archive Version 4.0 has been released on July 13, 2011.
wwPDB has released the new version of the PDB data, which reflects the review and resulting changes and corrections. All files in PDBx/mmCIF and PDBML/XML formats have been updated to reflect the new version(4.0) of PDB Exchange dictionary and XML schema, respectively. For PDB format files, the entries that have been changed during this remediation have been updated as version 3.3.(wwPDB News...)

12-Jan-2011

From January 15, 2011(JST), the wwPDB will resume the practice of providing advance notification of PDB entries that are about to be released in the following week.(wwPDB News...)

22-Dec-2010

The number of biomacromolecular structures available in the PDB archive now exceeds 70,000.(wwPDB News...)

6-Dec-2010

Deposition of chemical shift data has become mandatory when submitting NMR entries to the PDB. (more...)