English Japanese simplified Chinese traditional Chinese Korean Statistics Help FAQ Contact Us
Download >>

PDBj (Protein Data Bank Japan) maintains a centralized archive of macromolecular structures and provides integrated tools, in collaboration with the RCSB, the BMRB in USA and the PDBe in EU. PDBj is supported by JST-BIRD.

Deposition

  Data Deposition Information >>
PDB DepositionADIT NMR Data Deposition ADIT-NMR
Search
Search PDBMine Search NMR DataBMRB

Advanced Search >>

Accession number
Deposition code    
What's new
13-Jul-2010
The latest version of jV (jV3.8), the molecular graphics viewer developed by PDBj, has been released. A new functional command "displayatom on/off" has been added, which provides various display methods easily. Please download the newest version from here.
30-Jun-2010
Version 2 NMR restrain files have been released.(more...)
19-May-2010
The latest version of jV (jV3.7.1) has been released.
7-May-2010
The IP address of PDBj ftp server (ftp.pdbj.org) has been changed to 133.1.158.142. If you access to the PDBj ftp using the IP address directly, please replace the IP address with the new one. The IP address of PDBj Web server has also been changed. You do not need to make any change when accessing with the host name.
6-May-2010
wwPDB To Provide Validation Reports as PDFs (more...)
6-May-2010
Version 2 NMR Restraint Files to be Released in the wwPDB FTP on June 30, 2010 (more...)
4-Mar-2010
The IP address of PDB Archive server (pdb.protein.osaka-u.ac.jp) has been changed to 133.1.158.137. If you access to the PDBj Archive using the IP address directly, please replace the IP address with the new one. You do not need to make any change when accessing with the host name.
28-Dec-2009
The RESTful web service interface for PDBj Mine is now available. See the help page.
19-Dec-2009
wwPDB Statement on Retraction of UAB PDB Entries
24-Nov-2009
On November 25, 2009, our existing data viewer xPSSS will be integrated into PDBj Mine, which has recently been developed. (more...)
22-Oct-2009
On October 22, 2009, PDBj main pages and deposition pages in "traditional Chinese" have been released.
9-Oct-2009
On October 14, 2009, the weekly data update will be made, in principle, at 9:00 AM (JST) of every Wednesday, which corresponds to 0:00 (UTC). This update is simultaneously made at every member of the wwPDB: RCSB-PDB, PDBe, and PDBj.
9-Oct-2009
On October 14, 2009, we will start to use a new data viewer, PDBj Mine, which has been recently developed by PDBj. Because PDBj Mine uses a relational database, XPath/XQuery is not available. Our XML-based database, xPSSS, is still available for another couple of months.
25-Sep-2009
The changes to the wwPDB FTP site has been announced as "The advisory notice" at http://www.wwpdb.org/. (September 25, 2009)
66828
entries available
on 28 Jul., 2010

00:00(UTC) / 09:00(JST)