PDB entry search Result Page
- Summary Page
- Structural Details
- Experimental Details
- Functional Details
- Sequence Neighbor
- Download/Display
- Links
[Summary Page]
This page includes the summary information.

- PDB ID
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The PDB ID. Click thesequence informationto display another window included the residues sequence information in FASTA format. Click thedownload PDB format filebutton to display the PDB format file contents.
- SPLIT PDB ID
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In case the structural data is too large to store in single PDB ID, the data is stored in multiple PDB IDs and this field with the rest PDB ID is displayed in the summary page. This information is described in theSPLITrow in PDB formatted files, and in the/datablock/pdbx_database_relatedCategory/pdbx_database_related[@content_type=split]/@db_idattribute in PDBML files.
- RELATED PDB ID
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The PDB IDs of the related entries such as same molecule with another ligand will be displayed, if exist. Each PDB ID is linked to its summary page. This information is derived fromREMARK 900record of the PDB file or/datablock/database_PDB_remarkCategory/database_PDB_remark@id=900/textelement of the PDBML file.
- Descriptor
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Some words to indicate the contents of the molecule briefly (descriptor) is displayed.
- Title
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Brief explanation about the molecule (title) is displayed.
- Functional Keywords
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Keywords about this entry.
- Biological source
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The name of resource organism of this molecule. In case the molecule was obtained by gene introducing to other organism such as Escherichia coli, the name of gene resource organism is displayed. In the parenthesis, the common name of the organism is displayed.
- Cellular location
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The intracellular place including organelles which the molecule exists. Before it, the Uniprot ID may be displayed, if exists.
- Organ source
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The organ name which the molecule exists. Before it, the Uniprot ID may be displayed, if exists.
- Total number of polymer chains
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The number of molecules with chain ID. The hetero molecule such as ligands and solvent don't included in it.
- Total molecular weight
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The sum of molecular weight, except for water. Click the link at theStructural Details Pagesafter value, the Structural Details page will be displayed.
- Authors
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The author names, deposition date, and release date of the entry.
- Primary citation
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The information of primary citation involved in the entry.
- Other Database Information
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Links to the other related databases.
- Structure Viewers
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The molecule images of the entry, seen from three directions. In principle, protein and peptide chains will be displayed in cartoon expression, nucleotides will be in sticks, and the hetero molecules such as ligands will be in spacefill expression. The larger images and jV and Jmol applet which serve interactive operation interface are also available.
- Electron density map (EDM)
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If existed, a link to the electron density map page with jV will be available.
[Structural Details]
Details about structure, such as chain id, description, molecule type (polymer or not), links to related databases, molecular weight, number of molecule, biological source, and keywords of each subunit and ligand, are displayed.
And the information such as amino acid sequence, secondary structure, and functional site is also displayed.

[Experimental Details]
The experimental information is displayed.

[Functional Details]
Information about ligand binding sites and active sites.

They include categories described below. The detail of each category is displayed in another window.
- GO (Gene Ontology)
- PDB SITE (SITE information in PDB file)
- PDB HETATM (HETATM information in PDB file)
- PROSITE/UniProt
- SwissProt/UniProt
- CSA (catalytic site)
- CATRES (catalytic residues)
If existed, a link to the electron density map page with jV will be available.
[Sequence Neighbor]
The search result of chains with similar sequences.

[Download/Display]
In this page, it is available to display or download data files. The available format is PDB flat format, mmCIF and PDBML.

[Links]
Links to related databases.
