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TitleNew SNCA mutation and structures of α-synuclein filaments from juvenile-onset synucleinopathy.
Journal, issue, pagesActa Neuropathol, Vol. 145, Issue 5, Page 561-572, Year 2023
Publish dateFeb 27, 2023
AuthorsYang Yang / Holly J Garringer / Yang Shi / Sofia Lövestam / Sew Peak-Chew / Xianjun Zhang / Abhay Kotecha / Mehtap Bacioglu / Atsuo Koto / Masaki Takao / Maria Grazia Spillantini / Bernardino Ghetti / Ruben Vidal / Alexey G Murzin / Sjors H W Scheres / Michel Goedert /
PubMed AbstractA 21-nucleotide duplication in one allele of SNCA was identified in a previously described disease with abundant α-synuclein inclusions that we now call juvenile-onset synucleinopathy (JOS). This ...A 21-nucleotide duplication in one allele of SNCA was identified in a previously described disease with abundant α-synuclein inclusions that we now call juvenile-onset synucleinopathy (JOS). This mutation translates into the insertion of MAAAEKT after residue 22 of α-synuclein, resulting in a protein of 147 amino acids. Both wild-type and mutant proteins were present in sarkosyl-insoluble material that was extracted from frontal cortex of the individual with JOS and examined by electron cryo-microscopy. The structures of JOS filaments, comprising either a single protofilament, or a pair of protofilaments, revealed a new α-synuclein fold that differs from the folds of Lewy body diseases and multiple system atrophy (MSA). The JOS fold consists of a compact core, the sequence of which (residues 36-100 of wild-type α-synuclein) is unaffected by the mutation, and two disconnected density islands (A and B) of mixed sequences. There is a non-proteinaceous cofactor bound between the core and island A. The JOS fold resembles the common substructure of MSA Type I and Type II dimeric filaments, with its core segment approximating the C-terminal body of MSA protofilaments B and its islands mimicking the N-terminal arm of MSA protofilaments A. The partial similarity of JOS and MSA folds extends to the locations of their cofactor-binding sites. In vitro assembly of recombinant wild-type α-synuclein, its insertion mutant and their mixture yielded structures that were distinct from those of JOS filaments. Our findings provide insight into a possible mechanism of JOS fibrillation in which mutant α-synuclein of 147 amino acids forms a nucleus with the JOS fold, around which wild-type and mutant proteins assemble during elongation.
External linksActa Neuropathol / PubMed:36847833 / PubMed Central
MethodsEM (helical sym.)
Resolution2.0 - 3.6 Å
Structure data

EMDB-16188, PDB-8bqv:
Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
Method: EM (helical sym.) / Resolution: 2.0 Å

EMDB-16189, PDB-8bqw:
Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
Method: EM (helical sym.) / Resolution: 2.3 Å

EMDB-16600, PDB-8ce7:
Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: EM (helical sym.) / Resolution: 2.7 Å

EMDB-16603, PDB-8ceb:
Type2 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: EM (helical sym.) / Resolution: 2.8 Å

EMDB-16604: Alpha-synuclein filament assembled in vitro with mutant (7 residues insertion) protein
Method: EM (helical sym.) / Resolution: 3.6 Å

EMDB-16608: WT alpha-synuclein filament assembled in vitro
Method: EM (helical sym.) / Resolution: 3.5 Å

Chemicals

ChemComp-HOH:
WATER / Water

Source
  • homo sapiens (human)
  • Human (human)
KeywordsPROTEIN FIBRIL / alpha-synuclein / amyloid / fibril / insertion / juvenile-onset synucleinopathy (JOS) / synucleinopathy / mutation / in vitro / recombinant

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