[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,877 items for (author: liu & x)

EMDB-36730:
SARS-CoV-2 Spike RBD (dimer) in complex with two 2S-1244 nanobodies

EMDB-36735:
Dimer of SARS-CoV-2 BA.2 spike and IBT-CoV144(C3 symmetry)

EMDB-36740:
Dimer of SARS-CoV-2 BA.2 spike and IBT-CoV144(C1 symmetry)

EMDB-35827:
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate

EMDB-37652:
Structure of CbCas9 bound to 6-nucleotide complementary DNA substrate

EMDB-37656:
Structure of CbCas9-PcrIIC1 complex bound to 28-bp DNA substrate (20-nt complementary)

EMDB-37657:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)

EMDB-37762:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)

PDB-8iyq:
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate

PDB-8wmh:
Structure of CbCas9 bound to 6-nucleotide complementary DNA substrate

PDB-8wmm:
Structure of CbCas9-PcrIIC1 complex bound to 28-bp DNA substrate (20-nt complementary)

PDB-8wmn:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)

PDB-8wr4:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)

EMDB-37957:
Cryo-EM map for Mumps Virus L Protein Bound by Phosphoprotein Tetramer

EMDB-37958:
Cryo-EM map for Mumps Virus L Protein Bound by Phosphoprotein Tetramer (Focused map for CD-MTase-CTD)

EMDB-37959:
Cryo-EM map for Mumps Virus L Protein Bound by Phosphoprotein Tetramer (Focused map for RdRp-PRNTase)

EMDB-37960:
Cryo-EM map for Mumps Virus L Protein Bound by Phosphoprotein Tetramer (Focused map for tetrameric phosphoproteins)

EMDB-37961:
Cryo-EM map for Mumps Virus L Protein (State 2) Bound by Phosphoprotein Tetramer

EMDB-37962:
Cryo-EM map for Mumps Virus L protein (state2) Bound by Phosphoprotein Tetramer (Focused for tetrameric phosphoprotein)

EMDB-37964:
Structure of the Mumps Virus L Protein (state2) Bound by Phosphoprotein Tetramer (composite map)

PDB-8x01:
Structure of the Mumps Virus L Protein (state2) Bound by Phosphoprotein Tetramer

PDB-8yxl:
Structure of C-terminal domain of L protein from Mumps virus

PDB-8yxm:
Structure of N-terminal domain of L protein bound with Phosphoprotein from Mumps Virus

PDB-8yxo:
Structure of Phosphoprotein tetramer from mumps virus

PDB-8yxp:
Structure of mumps virus L protein (state2)

PDB-8yxr:
Structure of Phosphoprotein Tetramer from mumps virus

EMDB-38855:
GK tetramer of AtP5CS1 filament with adjacent hooks, reaction state

PDB-8y2h:
GK tetramer of AtP5CS1 filament with adjacent hooks, reaction state

EMDB-38087:
Cryo-EM structure of Staphylococcus aureus sigA-dependent RNAP-promoter open complex

EMDB-38088:
Cryo-EM structure of Staphylococcus aureus sigB-dependent RNAP-promoter open complex

PDB-8x6f:
Cryo-EM structure of Staphylococcus aureus sigA-dependent RNAP-promoter open complex

PDB-8x6g:
Cryo-EM structure of Staphylococcus aureus sigB-dependent RNAP-promoter open complex

EMDB-36646:
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex

PDB-8jtj:
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex

EMDB-36650:
Cryo-EM structure of GeoCas9-sgRNA binary complex

PDB-8jtr:
Cryo-EM structure of GeoCas9-sgRNA binary complex

EMDB-39920:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate

EMDB-39924:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate

PDB-8zc2:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate

PDB-8zc6:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate

EMDB-39374:
Cryo-EM structure of succinate receptor SUCR1 bound to succinic acid

PDB-8ykw:
Cryo-EM structure of succinate receptor SUCR1 bound to succinic acid

EMDB-36254:
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the Naproxen-bound state

PDB-8jh5:
Structure of the auxin exporter PIN1 in Arabidopsis thaliana in the Naproxen-bound state

EMDB-44740:
HIV Envelope trimer CH505 SOSIP.664 in complex with three CH103 E75K/D76N mutant antibody Fabs

EMDB-39375:
Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid

PDB-8ykx:
Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid

EMDB-39373:
Cryo-EM structure of succinate receptor SUCR1 bound to compound 31

PDB-8ykv:
Cryo-EM structure of succinate receptor SUCR1 bound to compound 31

EMDB-41409:
Cryo-EM structure of PCSK9 mimic HIT01-K21Q-R218E with AMG145 Fab

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more