[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 30 items for (author: zhang & xj)

EMDB-37444:
Cryo-EM structure of PAO1-ImcA with GMPCPP
Method: single particle / : Zhan XL, Zhang K, Wang CC, Fan Q, Tang XJ, Zhang X, Wang K, Fu Y, Liang HH

EMDB-28793:
Voltage-gated potassium channel Kv3.1 with novel positive modulator (9M)-9-{5-chloro-6-[(3,3-dimethyl-2,3-dihydro-1-benzofuran-4-yl)oxy]-4-methylpyridin-3-yl}-2-methyl-7,9-dihydro-8H-purin-8-one (compound 4)
Method: single particle / : Chen Y, Ishchenko A

EMDB-28795:
Voltage-gated potassium channel Kv3.1 apo
Method: single particle / : Chen Y, Ishchenko A

EMDB-16603:
Type2 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16604:
Alpha-synuclein filament assembled in vitro with mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16608:
WT alpha-synuclein filament assembled in vitro
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Sew PC, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16600:
Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16188:
Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-16189:
Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
Method: helical / : Yang Y, Garringer JH, Shi Y, Lovestam S, Peak-Chew SY, Zhang XJ, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini GM, Ghetti B, Vidal R, Murzin GA, Scheres HWS, Goedert M

EMDB-15285:
Cryo-EM structure of alpha-synuclein filaments from Parkinson's disease and dementia with Lewy bodies
Method: helical / : Yang Y, Shi Y, Schweighauser M, Zhang XJ, Kotecha A, Murzin AG, Garringer HJ, Cullinane P, Saito Y, Foroud T, Warner TT, Hasegawa K, Vidal R, Murayama S, Revesz T, Ghetti B, Hasegawa M, Lashley T, Scheres HWS, Goedert M

EMDB-32439:
Human Nav1.8 with A-803467, class I
Method: single particle / : Yan N, Pan XJ, Huang XS, Huang GX

EMDB-32451:
Human Nav1.8 with A-803467, class II
Method: single particle / : Yan N, Pan XJ, Huang XS, Huang GX

EMDB-32475:
Human Nav1.8 with A-803467, class III
Method: single particle / : Yan N, Pan XJ, Huang XS, Huang GX

EMDB-32476:
Apo human Nav1.8
Method: single particle / : Yan N, Pan XJ, Huang XS, Huang GX

EMDB-30924:
CryoEM structure of full length mouse TRPML2
Method: single particle / : Song XJ, Li J, Duan JJ, Zhang J

EMDB-30868:
liver ribosome
Method: subtomogram averaging / : Zhang JG, Zhang DY, Sun L, Ji G, Huang XJ, Niu TX, Xu JS, Ma CY, Zhu Y, Gao N, Xu W, Sun F

EMDB-30700:
Human SARM1 inhibitory state bounded with inhibitor dHNN
Method: single particle / : Cai Y, Zhang H

EMDB-4769:
Cryo-EM structure of bacterial RNAP with a DNA mimic protein Ocr from T7 phage
Method: single particle / : Ye FZ, Zhang XD

EMDB-9617:
Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
Method: single particle / : Pan XJ, li ZQ, Zhou Q, Shen HZ, Wu K, Huang XS, Chen JF, Zhang JR, Zhu XC, Lei JL, Xiong W, Gong HP, Xiao BL, Yan N

EMDB-6995:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

EMDB-6996:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

EMDB-6997:
Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Method: single particle / : Shen HZ, li ZQ, Jiang Y, Pan XJ, Wu JP, Cristofori-Armstrong B, Smith JJ, Chin YKY, Lei JL, Zhou Q, King GF, Yan N

EMDB-6834:
Architecture of SWI/SNF remodeling complex
Method: single particle / : Wang XJ, Cai G

EMDB-6399:
Structure of the intact ATM/Tel1 kinase
Method: single particle / : Wang XJ, Chu HY, Lv MJ, Zhang ZH, Qiu SW, Liu HY, Shen XT, Wang WW, Cai G

EMDB-6382:
Three-dimensional structure of Maize Chlorotic Mottle Virus by Single Particle Analysis
Method: single particle / : Wang CY, Zhang QF, Gao YZ, Zhou XP, Ji G, Huang XJ, Hong J, Zhang CY

EMDB-6483:
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Method: single particle / : Zhang J, Pan XJ, Yan KG, Sun S, Gao N, Sui SF

EMDB-6484:
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Method: single particle / : Zhang J, Pan XJ, Yan KG, Sun S, Gao N, Sui SF

EMDB-6485:
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Method: single particle / : Zhang J, Pan XJ, Yan KG, Sun S, Gao N, Sui SF

EMDB-6486:
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Method: single particle / : Zhang J, Pan XJ, Yan KG, Sun S, Gao N, Sui SF

EMDB-3244:
Electron negative-staining microscopy of an aerolysin-like protein
Method: electron crystallography / : Jia N, Liu N, Cheng W, Jiang YL, Sun H, Chen LL, Peng JH, Zhang YH, Zhang ZH, Wang XJ, Cai G, Wang JF, Zhang ZY, Wu H, Wang HW, Chen YX, Zhou CZ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more