[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 101 items for (author: molodtsov & v)

EMDB-42453:
Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42454:
Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42473:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42474:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42477:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42479:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42492:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42493:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-42503:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 30 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8upo:
Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8upr:
Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8uql:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8uqm:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8uqp:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8ur0:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8urh:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8uri:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8urx:
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 30 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27864:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27865:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27897:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27913:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27914:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27915:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27916:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27917:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27918:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27928:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27929:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27930:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27931:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27932:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27933:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e3f:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e3h:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5k:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5l:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5o:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5p:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e6w:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e6x:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e6z:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e70:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-24148:
Escherichia coli sigma 70-dependent paused transcription elongation complex
Method: single particle / : Molodtsov V, Su M

PDB-7n4e:
Escherichia coli sigma 70-dependent paused transcription elongation complex
Method: single particle / : Molodtsov V, Su M, Ebright RH

EMDB-23902:
Escherichia coli RNA polymerase core enzyme
Method: single particle / : Qayyum MZ, Murakami KS

PDB-7mkp:
Escherichia coli RNA polymerase core enzyme
Method: single particle / : Qayyum MZ, Murakami KS

EMDB-23900:
Escherichia coli RNA polymerase and RapA elongation complex
Method: single particle / : Qayyum MZ, Murakami KS

EMDB-23901:
Escherichia coli RNA polymerase elongation complex
Method: single particle / : Qayyum MZ, Murakami KS

EMDB-23903:
Escherichia coli RNA polymerase and RapA binary complex
Method: single particle / : Qayyum MZ, Murakami KS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more