[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 126 items for (author: maker & a)

EMDB-40589:
hPAD4 bound to Activating Fab hA362
Method: single particle / : Maker A, Verba KA

EMDB-40590:
hPAD4 bound to inhibitory Fab hI365
Method: single particle / : Maker A, Verba KA

PDB-8smk:
hPAD4 bound to Activating Fab hA362
Method: single particle / : Maker A, Verba KA

PDB-8sml:
hPAD4 bound to inhibitory Fab hI365
Method: single particle / : Maker A, Verba KA

EMDB-16876:
Structure of the Tau-PAM4 Type 1 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

EMDB-16881:
Structure of the Fmoc-Tau-PAM4 Type 2 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

EMDB-16883:
Structure of the Fmoc-Tau-PAM4 Type 3 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

EMDB-16886:
Structure of the Fmoc-Tau-PAM4 Type 4 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8oh2:
Structure of the Tau-PAM4 Type 1 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8ohi:
Structure of the Fmoc-Tau-PAM4 Type 2 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8ohp:
Structure of the Fmoc-Tau-PAM4 Type 3 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

PDB-8oi0:
Structure of the Fmoc-Tau-PAM4 Type 4 amyloid fibril
Method: helical / : Wilkinson M, Louros N, Tsaka G, Ramakers M, Morelli C, Garcia T, Gallardo RU, D'Haeyer S, Goossens V, Audenaert D, Thal DR, Ranson NA, Radford SE, Rousseau F, Schymkowitz J

EMDB-41510:
Eukaryotic translation initiation factor 2B tetramer
Method: single particle / : Wang L, Lawrence R, Sangwan S, Anand A, Shoemaker S, Deal A, Marqusee S, Watler P

EMDB-41566:
Eukaryotic translation initiation factor 2B with a mutation (L516A) in the delta subunit
Method: single particle / : Wang L, Lawrence R, Sangwan S, Anand A, Shoemaker S, Deal A, Marqusee S, Watler P

PDB-8tqo:
Eukaryotic translation initiation factor 2B tetramer
Method: single particle / : Wang L, Lawrence R, Sangwan S, Anand A, Shoemaker S, Deal A, Marqusee S, Watler P

PDB-8tqz:
Eukaryotic translation initiation factor 2B with a mutation (L516A) in the delta subunit
Method: single particle / : Wang L, Lawrence R, Sangwan S, Anand A, Shoemaker S, Deal A, Marqusee S, Watler P

PDB-8skw:
MicroED structure of d(CGCGCG)2 Z-DNA
Method: electron crystallography / : Haymaker A, Bardin AA, Martynowycz MW, Nannenga BL

EMDB-25201:
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
Method: single particle / : Blikstad C, Dugan E

PDB-7smk:
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
Method: single particle / : Blikstad C, Dugan E, Laughlin TG, Liu M, Shoemaker S, Remis J, Savage DF

EMDB-25228:
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
Method: single particle / : Blikstad C, Dugan E

PDB-7snv:
H. neapolitanus carboxysomal rubisco/CsoSCA-peptide (1-50)complex
Method: single particle / : Blikstad C, Dugan E, Laughlin TG, Liu M, Shoemaker S, Remis J, Savage DF

EMDB-27973:
Erwinia amylovora 70S Ribosome
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-27993:
Erwinia amlyavora 50S ribosome
Method: subtomogram averaging / : Prichard A, Lee J, Laughlin TG, Lee A, Thomas K, Sy A, Spencer T, Asavavimol A, Cafferata A, Cameron M, Chiu N, Davydov D, Desai I, Diaz G, Guereca M, Hearst K, Huang L, Jacobs E, Johnson A, Kahn S, Koch R, Martinez A, McDonald-Uyeno A, Norquist M, Pau T, Prasad G, Saam K, Sandu M, Sarabia A, Schumaker S, Sonin A, Zhao A, Corbett A, Pogliano K, Meyer J, Grose J, Villa E, Dutton R, Pogliano J

EMDB-28003:
Erwinia phage vB_EamM_RAY (RAY) Capsid Vertex
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28004:
Erwinia phage vB_EamM_RAY (RAY) Capsid Collar
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28005:
Erwinia phage vB_EamM_RAY (RAY) Tail Sheath
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28006:
Erwinia phage vB_EamM_RAY (RAY) Baseplate
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28007:
Erwinia phage vB_EamM_RAY (RAY) Chimallin
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28008:
Erwinia phage vB_EamM_RAY (RAY) Putative PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28009:
Pseudomonas chlororaphis phage 201phi2-1 PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-28010:
Pseudomonas phage phiKZ PhuZ Filament
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-14784:
AMC009 SOSIPv5.2 + ACS110 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14785:
AMC009 SOSIPv.52 in complex with ACS114 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14786:
AMC009 SOSIPv5.2 in complex with ACS117 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14787:
AMC009 SOSIPv5.2 in complex with ACS122 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14788:
AMC009 SOSIPv5.2 in complex with ACS125 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14789:
AMC009 SOSIPv5.2 in complex with ACS131 Fab
Method: single particle / : van Schooten J, Ward A

EMDB-14783:
AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124
Method: single particle / : van Schooten J, Ozorowski G, Ward A

PDB-7zlk:
AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124
Method: single particle / : van Schooten J, Ozorowski G, Ward A

EMDB-26281:
TMEM106B(120-254) singlet amyloid fibril from dementia with Lewy bodies (DLB).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26282:
TMEM106B(120-254) doublet amyloid fibril from dementia with Lewy bodies (DLB).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26283:
Low-resolution map of tau filament from progressive supranuclear palsy (PSP) case 3.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26284:
TMEM106B(120-254) singlet amyloid fibril from progressive supranuclear palsy (PSP) case 1.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26285:
TMEM106B(120-254) singlet amyloid fibril from progressive supranuclear palsy (PSP) case 2.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26286:
TMEM106B(120-254) doublet amyloid fibril from progressive supranuclear palsy (PSP) case 2.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26268:
High-resolution map of tau filament from progressive supranuclear palsy (PSP) case 1
Method: helical / : FItzpatrick AWP, Stowell MHB

EMDB-26273:
TMEM106B(120-254) protofilament from progressive supranuclear palsy (PSP) case 2
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

EMDB-26274:
TMEM106B(120-254) protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 1)
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

EMDB-26275:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 2)
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

EMDB-26276:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4)
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more