[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 34 items for (author: gan & jh)

EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

EMDB-35670:
Structure of Full-Length AsfvPrimPol in Apo-Form
Method: single particle / : Shao ZW, Su SC, Gan JH

EMDB-35671:
Structure of Full-Length AsfvPrimPol in Complex-Form
Method: single particle / : Shao ZW, Su SC, Gan JH

EMDB-16454:
Electron cryo-tomography of HeLa cells expressing untagged Cidec
Method: electron tomography / : Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W

EMDB-16455:
Electron cryo-tomography of HeLa cells expressing Cidec-EGFP
Method: electron tomography / : Ganeva I, Lim K, Boulanger J, Hoffmann PC, Muriel O, Borgeaud AC, Hagen WJH, Savage DB, Kukulski W

EMDB-14325:
Cytoplasmic ring of the human nuclear pore complex from isolated HeLa nuclear envelopes
Method: subtomogram averaging / : Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

EMDB-14326:
Structure of nuclear pore complex from HEK cells with GP210 knockout
Method: subtomogram averaging / : Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

EMDB-14327:
Nuclear pore complex from intact HeLa cells
Method: subtomogram averaging / : Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

EMDB-14328:
Inner/spoke ring of the human nuclear pore complex from isolated HeLa nuclear envelopes.
Method: subtomogram averaging / : Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

EMDB-14330:
Nuclear ring of the human nuclear pore complex from isolated HeLa nuclear envelopes
Method: subtomogram averaging / : Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

EMDB-14243:
cryoEM structure of human Nup155 (residues 19-981)
Method: single particle / : Taniguchi R, Beck M

EMDB-25471:
Structure of EBOV GP lacking the mucin-like domain with 1C11 scFv and 1C3 Fab bound
Method: single particle / : Milligan JC, Yu X, Saphire EO

EMDB-11222:
Structure of SARS-CoV-2 spike glycoprotein (S) trimer determined by sub-tomogram averaging
Method: subtomogram averaging / : Turonova B, Sikora M, Schurmann C, Hagen W, Welsch S, Blanc FEC, von Bulow S, Gecht M, Bagola K, Horner C, van Zandbergen G, Landry J, de Azevedo NTD, Mosalaganti S, Schwarz A, Covino R, Muhlebach M, Hummer G, Locker JK, Beck M

EMDB-11223:
Structure of SARS-CoV-2 spike glycoprotein (S) monomer in a closed conformation determined by sub-tomogram averaging
Method: subtomogram averaging / : Turonova B, Sikora M, Schurmann C, Hagen WJH, Welsch S, Blanc FEC, von Bulow S, Gecht M, Bagola K, Horner C, van Zandbergen G, Landry J, de Azevedo NTD, Mosalaganti S, Schwarz A, Covino R, Muhlebach M, Hummer G, Locker JK, Beck M

EMDB-21688:
Structure of human TRPA1 in complex with inhibitor GDC-0334
Method: single particle / : Rohou A, Rouge L, Arthur CP

EMDB-20864:
Structure of two nucleosomes bridged by human PARP2
Method: single particle / : Gaullier G, Morgan GP, Luger K

EMDB-22190:
Subtomogram averaging map of yeast polysome
Method: electron tomography / : Kastritis PL

EMDB-22196:
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Method: single particle / : Zhou Y, Bartesaghi A, Silva GM

EMDB-22197:
Cryo-EM Structure of K63R Ubiquitin Mutant Consensus Ribosome under Oxidative Stress
Method: single particle / : Zhou Y, Bartesaghi A, Silva GM

EMDB-22198:
Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
Method: single particle / : Zhou Y, Bartesaghi A, Silva GM

EMDB-10207:
A 4.2 Angstrom structure of HIV-1 CA-SP1
Method: subtomogram averaging / : Turonova B, Hagen WJH, Obr M, Mosalaganti S, Kraeusslich HG, Beck M

EMDB-20017:
Structure of the rice hyperosmolality-gated ion channel OSCA1.2
Method: single particle / : Maity K, Heumann JM

EMDB-9674:
Cryo-EM structure of CV-A10 mature virion
Method: single particle / : Chen JH, Ye XH

EMDB-9675:
Cryo-EM structure of CV-A10 native empty particle
Method: single particle / : Chen JH, Ye XH

EMDB-8625:
Cryo-EM structure of the MAL TIR domain filament
Method: helical / : Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carrol A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B

PDB-5uzb:
Cryo-EM structure of the MAL TIR domain filament
Method: helical / : Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carrol A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B

EMDB-3244:
Electron negative-staining microscopy of an aerolysin-like protein
Method: electron crystallography / : Jia N, Liu N, Cheng W, Jiang YL, Sun H, Chen LL, Peng JH, Zhang YH, Zhang ZH, Wang XJ, Cai G, Wang JF, Zhang ZY, Wu H, Wang HW, Chen YX, Zhou CZ

EMDB-6001:
Fako virus capsid: a newly-isolated reovirus has the simplest genomic and structural organization of any reovirus
Method: single particle / : Auguste AJ, Kaelber JT, Fokam EB, Guzman H, Carrington CVF, Erasmus JH, Kamgang B, Popov VL, Jakana J, Liu X, Wood TG, Widen SG, Vasilakis N, Tesh RB, Chiu W, Weaver SC

EMDB-6002:
Fako virus virion: a newly-isolated reovirus has the simplest genomic and structural organization of any reovirus
Method: single particle / : Auguste AJ, Kaelber JT, Fokam EB, Guzman H, Carrington CVF, Erasmus JH, Kamgang B, Popov VL, Jakana J, Liu X, Wood TG, Widen SG, Vasilakis N, Tesh RB, Chiu W, Weaver SC

EMDB-2198:
Architecture of human translation initiation factor 3
Method: single particle / : Querol-Audi J, Sun C, Mortimer S, Arias-Palomo E, Vogan J, Doudna J, Nogales E, Cate J

EMDB-2199:
Architecture of human translation initiation factor 3
Method: single particle / : Querol-Audi J, Sun C, Mortimer S, Arias-Palomo E, Vogan J, Doudna J, Nogales E, Cate J

EMDB-2166:
Architecture of human translation initiation factor 3
Method: single particle / : Querol-Audi J, Sun C, Vogan J, Cate J, Nogales E

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more