Localization of the large subunit ribosomal proteins into a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome
by single particle reconstruction, at 5.5 A resolution

Entry | |
| Summary | |
| Database / ID | PORTEIN DATA BANK (PDB) / 3izr |
|---|---|
| Title | Localization of the large subunit ribosomal proteins into a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome |
| Descriptor | Ribosomal protein 60S ribosomal protein L2 Ribosomal protein L11 60S ribosomal protein L9 60S ribosomal protein L7a 60S ribosomal protein L10-1 Ribosomal protein L17 Ribosomal protein L15 60S ribosomal protein L27a Ribosomal protein L18 60S ribosomal protein L5-2
Ribosomal protein L19 60s ribosomal protein L21 ribosomal protein L17 60S ribosomal protein L23A 60S ribosomal protein L24 60S ribosomal protein L26-1 60S ribosomal L28 protein 60S ribosomal protein L29 60S ribosomal protein L30 60S ribosomal protein L31 Ribosomal L32 Ribosomal protein L37 60S ribosomal protein L38 Ribosomal protein L39 60S ribosomal protein L44 Putative uncharacterized protein 60S ribosomal protein L6 Ribosomal protein L14 Os01g0752300 protein 60S ribosomal protein L22 Ribosomal protein l34 ribosomal protein L35A 60S ribosomal protein L36 Os03g0234200 protein Os04g0598200 protein Ribosomal protein P1 Acidic ribosomal protein P2 60S ribosomal protein L35 Ribosomal protein L7 60S acidic ribosomal protein P0 60S ribosomal protein L4/L1 Ribosomal protein L13a 60S ribosomal protein L37a |
| Keywords | RIBOSOME, eukaryotic ribosome, homology modeling, de novo modeling, ribosomal proteins, novel ribosomal proteins |
| Authors | Armache, J.-P., Jarasch, A., Anger, A.M., Villa, E., Becker, T., Bhushan, S., Jossinet, F., Habeck, M., Dindar, G., Franckenberg, S., Marquez, V., Mielke. T., Thomm, M., Berninghausen, O., Beatrix, B., Soeding, J., Westhof, E., Wilson, D.N., Beckmann, R. |
| Date | Deposition: 2010-12-06, Release: 2010-12-15 |
| PDBj Mine pages | Summary, Structural Details, Experimental Details, Functional Details |
| Other databases | RCSB-PDB, PDBe, CATH, CE, FSSP, SCOP, VAST |
| Sequence details | THE CRYO-EM MAP WAS OBTAINED FROM T. AESTIVUM. SOME OF THE CHAINS WERE MODELED USING THE HOMOLOGS FROM OTHER ORGANISMS. |
| Structure Visualization | |
| Movies | Movie Page#1: Depositted structure unit, Made by Jmol #2: Superimposing with simplified surface model of EM map, EMDB-1780, Made by Jmol #3: With PDB-3iz6, PDB-3iz7, PDB-3iz9, Made by Jmol #4: Superimposing with EM 3D map: EMDB-1780 (with PDB-3iz6, PDB-3iz7, PDB-3iz9), Made by UCSF CHIMERA |
| Structure viewers | Yorodumi, jV4, Jmol, Biological unit (Images, jV) |
| Related Structure Data | |
| Related Entries |
Cite: data citing same article Fit: target map of fitting Split: split data constructing the same model |
| Similar strucutres (beta) |
List of similar structure data about Omokage system |
Components | |
| ID 1 : 60S ribosomal protein L1 (L1p) | |
| Image | ![]() ![]() |
|---|---|
| Description | 60S ribosomal protein L1 (L1p) |
| Type | polymer |
| Formula weight | 24604.406 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L3, Sequence view |
| ID 2 : 60S ribosomal protein L2 (L2p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L2 (L2p) |
| Type | polymer |
| Formula weight | 28309.861 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q2QNF3, Sequence view |
| ID 3 : 60S ribosomal protein L11 (L5p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L11 (L5p) |
| Type | polymer |
| Formula weight | 20727.240 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L2, Sequence view |
| ID 4 : 60S ribosomal protein L9 (L6p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L9 (L6p) |
| Type | polymer |
| Formula weight | 21382.975 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: P49210, Sequence view |
| ID 5 : 60S ribosomal protein L7a (L7ae) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L7a (L7ae) |
| Type | polymer |
| Formula weight | 29368.363 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: P35685, Sequence view |
| ID 6 : 60S ribosomal protein L23 (L14p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L23 (L14p) |
| Type | polymer |
| Formula weight | 15040.948 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K4, Sequence view |
| ID 7 : 60S ribosomal protein L15 (L15e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L15 (L15e) |
| Type | polymer |
| Formula weight | 24395.760 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8H8S1, Sequence view |
| ID 8 : 60S ribosomal protein L27a (L15p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L27a (L15p) |
| Type | polymer |
| Formula weight | 15834.893 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6EUQ7, Sequence view |
| ID 9 : 60S ribosomal protein L18 (L18e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L18 (L18e) |
| Type | polymer |
| Formula weight | 21379.504 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L0, Sequence view |
| ID 10 : 60S ribosomal protein L5 (L18p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L5 (L18p) |
| Type | polymer |
| Formula weight | 34723.461 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8L4L4, Sequence view |
| ID 11 : 60S ribosomal protein L19 (L19e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L19 (L19e) |
| Type | polymer |
| Formula weight | 24486.115 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q7XY20, Sequence view |
| ID 12 : 60S ribosomal protein L21 (L21e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L21 (L21e) |
| Type | polymer |
| Formula weight | 18691.898 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q7XYC9, Sequence view |
| ID 13 : 60S ribosomal protein L17 (L22p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L17 (L22p) |
| Type | polymer |
| Formula weight | 19536.658 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6K1W6, Sequence view |
| ID 14 : 60S ribosomal protein L23a (L23p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L23a (L23p) |
| Type | polymer |
| Formula weight | 17091.594 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q94CM9, Sequence view |
| ID 15 : 60S ribosomal protein L24 (L24e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L24 (L24e) |
| Type | polymer |
| Formula weight | 18505.031 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5N754, Sequence view |
| ID 16 : 60S ribosomal protein L26 (L24p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L26 (L24p) |
| Type | polymer |
| Formula weight | 16971.912 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q2QXN5, Sequence view |
| ID 17 : 60S ribosomal protein L28 (L28e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L28 (L28e) |
| Type | polymer |
| Formula weight | 16639.592 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5TKP3, Sequence view |
| ID 18 : 60S ribosomal protein L29 (L29e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L29 (L29e) |
| Type | polymer |
| Formula weight | 7069.084 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q9FP55, Sequence view |
| ID 19 : 60S ribosomal protein L30 (L30e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L30 (L30e) |
| Type | polymer |
| Formula weight | 12294.481 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K9, Sequence view |
| ID 20 : 60S ribosomal protein L31 (L31e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L31 (L31e) |
| Type | polymer |
| Formula weight | 14092.458 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6ZGV5, Sequence view |
| ID 21 : 60S ribosomal protein L32 (L32e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L32 (L32e) |
| Type | polymer |
| Formula weight | 15740.784 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q3MST7, Sequence view |
| ID 22 : 60S ribosomal protein L37 (L37e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L37 (L37e) |
| Type | polymer |
| Formula weight | 10823.726 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6Z8Y5, Sequence view |
| ID 23 : 60S ribosomal protein L38 (L38e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L38 (L38e) |
| Type | polymer |
| Formula weight | 8053.678 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8GVY2, Sequence view |
| ID 24 : 60S ribosomal protein L39 (L39e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L39 (L39e) |
| Type | polymer |
| Formula weight | 6528.846 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K7, Sequence view |
| ID 25 : 60S ribosomal protein L42 (L44e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L42 (L44e) |
| Type | polymer |
| Formula weight | 12174.534 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8H5N0, Sequence view |
| ID 26 : 60S ribosomal protein L41 (L41e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L41 (L41e) |
| Type | polymer |
| Formula weight | 3445.458 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8GVZ2, Sequence view |
| ID 27 : Unknown 60S ribosomal protein XL | |
| Image | ![]() ![]() |
| Description | Unknown 60S ribosomal protein XL |
| Type | polymer |
| Formula weight | 1720.123 Da |
| Number of molecules | 2 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | Sequence view |
| ID 28 : Unknown 60S ribosomal protein XL3 | |
| Image | ![]() ![]() |
| Description | Unknown 60S ribosomal protein XL3 |
| Type | polymer |
| Formula weight | 1209.491 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | Sequence view |
| ID 29 : 60S ribosomal protein L6 (L6e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L6 (L6e) |
| Type | polymer |
| Formula weight | 24589.963 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L4, Sequence view |
| ID 30 : 60S ribosomal protein L13 (L13e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L13 (L13e) |
| Type | polymer |
| Formula weight | 15592.276 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | Sequence view |
| ID 31 : 60S ribosomal protein L14 (L14e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L14 (L14e) |
| Type | polymer |
| Formula weight | 15418.488 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6K1Q6, Sequence view |
| ID 32 : 60S ribosomal protein L18a (L18ae) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L18a (L18ae) |
| Type | polymer |
| Formula weight | 21444.395 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q0JJA0, Sequence view |
| ID 33 : 60S ribosomal protein L22 (L22e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L22 (L22e) |
| Type | polymer |
| Formula weight | 14443.715 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6YSX0, Sequence view |
| ID 34 : 60S ribosomal protein L27 (L27e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L27 (L27e) |
| Type | polymer |
| Formula weight | 15508.757 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q7XC31, Sequence view |
| ID 35 : 60S ribosomal protein L34 (L34e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L34 (L34e) |
| Type | polymer |
| Formula weight | 13808.531 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K8, Sequence view |
| ID 36 : 60S ribosomal protein L35a (L35ae) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L35a (L35ae) |
| Type | polymer |
| Formula weight | 12684.832 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6I608, Sequence view |
| ID 37 : 60S ribosomal protein L36 (L36e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L36 (L36e) |
| Type | polymer |
| Formula weight | 12563.149 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L5, Sequence view |
| ID 38 : 60S ribosomal protein L40 (L40e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L40 (L40e) |
| Type | polymer |
| Formula weight | 6295.680 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q10PH1, Sequence view |
| ID 39 : 60S ribosomal protein L12 (L11p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L12 (L11p) |
| Type | polymer |
| Formula weight | 17775.838 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q0JAI2, Sequence view |
| ID 40 : 60S acidic ribosomal protein P11 - P1 (L12P) | |
| Image | ![]() ![]() |
| Description | 60S acidic ribosomal protein P11 - P1 (L12P) |
| Type | polymer |
| Formula weight | 11204.690 Da |
| Number of molecules | 2 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K5, Sequence view |
| ID 41 : 60S acidic ribosomal protein P21 - P2 (L12P) | |
| Image | ![]() ![]() |
| Description | 60S acidic ribosomal protein P21 - P2 (L12P) |
| Type | polymer |
| Formula weight | 11597.089 Da |
| Number of molecules | 2 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q7X729, Sequence view |
| ID 42 : 60S ribosomal protein L35 (L29p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L35 (L29p) |
| Type | polymer |
| Formula weight | 14401.178 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q8L805, Sequence view |
| ID 43 : 60S ribosomal protein L7 (L30p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L7 (L30p) |
| Type | polymer |
| Formula weight | 28175.363 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7K6, Sequence view |
| ID 44 : 60S acidic ribosomal protein P0 (L10p) | |
| Image | ![]() ![]() |
| Description | 60S acidic ribosomal protein P0 (L10p) |
| Type | polymer |
| Formula weight | 34418.832 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: P41095, Sequence view |
| ID 45 : 60S ribosomal protein L3 (L3p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L3 (L3p) |
| Type | polymer |
| Formula weight | 44720.809 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q7X744, Sequence view |
| ID 46 : 60S ribosomal protein L4 (L4p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L4 (L4p) |
| Type | polymer |
| Formula weight | 44822.438 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q6ZLB8, Sequence view |
| ID 47 : 60S ribosomal protein L13a (L13p) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L13a (L13p) |
| Type | polymer |
| Formula weight | 23581.338 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5I7L1, Sequence view |
| ID 48 : 60S ribosomal protein L43 (L37ae) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L43 (L37ae) |
| Type | polymer |
| Formula weight | 10266.216 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q5QM99, Sequence view |
| ID 49 : 60S ribosomal protein L10 (L10e) | |
| Image | ![]() ![]() |
| Description | 60S ribosomal protein L10 (L10e) |
| Type | polymer |
| Formula weight | 25400.961 Da |
| Number of molecules | 1 |
| Source | Method: Isolated from a natural source Common name: wheat NCBI taxonomy: ID:4565Organism scientific: Triticum aestivum |
| Links | UniProt: Q0ITS8, Sequence view |
Sample | |
| Assembly | |
| Aggregation state | PARTICLE |
|---|---|
| Name | Programmed Triticum aestivum 80S ribosome |
| Experiment | |
| Reconstruction method | SINGLE PARTICLE |
| Specimen type | VITREOUS ICE (CRYO EM) |
| Sample preparation | |
| pH | 7.5 |
Electron Microscopy |
Processing | |
| Single particle entity | |
| Symmetry type | ASYMMETRIC |
|---|---|
| 3D reconstruction | |
| Actual pixel size | 1.2375 A/pix |
| Method | Single Particle |
| Nominal pixel size | 1.2375 A/pix |
| Resolution | 5.5 A |
| Software | Spider |
| Refine hist | |
| Total atoms | 55921 |
| Protein atoms | 55921 |
Download | |||
| PDB format | |||
| All | pdb3izr.ent.gz pdb3izr.ent (uncompressed file) | ||
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| Header only | pdb3izr.ent.gz | ||
| mmCIF format | |||
| mmCIF | 3izr.cif.gz | ||
| XML format | |||
| All | 3izr.xml.gz | ||
| No-atom | 3izr-noatom.xml.gz | ||
| Ext-atom | 3izr-extatom.xml.gz | ||
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